RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 TMEM255BQ8WV15 326 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 KRT35Q92764 455 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 BCL2L2Q92843 193 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 TMEM19Q96HH6 336 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 SFXN2Q96NB2 322 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 CACNG6Q9BXT2 260 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 EBF2Q9HAK2 575 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 TUFT1Q9NNX1 390 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 IL1RAPL2Q9NP60 686 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 MID1IP1Q9NPA3 183 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 HIF1ANQ9NWT6 349 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 OCIAD1Q9NX40 245 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 ADPRHL2Q9NX46 363 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 P4HTMQ9NXG6 502 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 TBC1D7Q9P0N9 293 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 CACNG4Q9UBN1 327 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 WDR83OSQ9Y284 106 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 CD8B2A6NJW9 211 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 DUXAA6NLW8 204 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 SMTNL1A8MU46 457 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 E9PI62 339 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 H0YIG0 161 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 ZNF263O14978 683 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 BUD23O43709 281 aaKnown RBP3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 HTATSF1O43719 755 aaKnown RBP3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 RTN2O75298 545 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 CRYABP02511 175 aaKnown RBP3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 LIPFP07098 398 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 ANKRD34CP0C6C1 535 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 HAPLN1P10915 354 aaPredicted RBP3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 EEF1B2P24534 225 aaKnown RBP3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 FRKP42685 505 aaPredicted RBP3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 NKX2-1P43699 371 aaPredicted RBP3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 AMPHP49418 695 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 BPIFB3P59826 476 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 SEC61A1P61619 476 aaKnown RBP3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 ZNF415Q09FC8 603 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 ZBTB17Q13105 803 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 CUL3Q13618 768 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 PTGISQ16647 500 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 KBTBD12Q3ZCT8 623 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 PHLDA2Q53GA4 152 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 STXBP5Q5T5C0 1151 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 OR7E24Q6IFN5 339 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 PODNL1Q6PEZ8 512 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 TMEM270Q6UE05 265 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 PIWIL4Q7Z3Z4 852 aaKnown RBP3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 NRARPQ7Z6K4 114 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 ZSCAN30Q86W11 494 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 SIAH3Q8IW03 269 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 THAP8Q8NA92 274 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 TMED6Q8WW62 240 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 IRGQQ8WZA9 623 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 SYN2Q92777 582 aaPredicted RBP3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 RIT1Q92963 219 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 WBP2Q969T9 261 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 EXOC4Q96A65 974 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 CENPTQ96BT3 561 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 SGF29Q96ES7 293 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 SGK494Q96LW2 274 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 MYADMQ96S97 322 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 TM6SF1Q9BZW5 370 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 MINDY3Q9H8M7 445 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 UBTD1Q9HAC8 227 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 IARS2Q9NSE4 1012 aaKnown RBP3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 CYP39A1Q9NYL5 469 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 RALYQ9UKM9 306 aaKnown RBP3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 ACAD8Q9UKU7 415 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 MYO6Q9UM54 1294 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 TRIM17Q9Y577 477 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 KLK4Q9Y5K2 254 aa3.23□□□□□ -1.89
HMGN1P28-201ENST00000521340 KIAA1210Q9ULL0 1709 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 LRRD1A4D1F6 860 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 SDR42E2A6NKP2 422 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 YDJCA8MPS7 323 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 KRTAP29-1A8MX34 341 aaPredicted RBP3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 RNASEH1O60930 286 aaKnown RBP3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 AKAP3O75969 853 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 BAG4O95429 457 aaKnown RBP3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 GSRP00390 522 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 VIMP08670 466 aaKnown RBP3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 HSPA8P11142 646 aaKnown RBP3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 POLR2CP19387 275 aaPredicted RBP3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 SLC6A6P31641 620 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 AHRP35869 848 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 CDKN1AP38936 164 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 RPL21P46778 160 aaKnown RBP3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 OR3A1P47881 315 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 HTR6P50406 440 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 FUT6P51993 359 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 MTCP1P56278 107 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 STARD6P59095 220 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 KRTAP10-9P60411 292 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 TRAF2Q12933 501 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 RPS6KA1Q15418 735 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 SGCBQ16585 318 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 SMU1Q2TAY7 513 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 TMEM35AQ53FP2 167 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 183.5 ms