RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 RNF187Q5TA31 235 aaPredicted RBP16.47■□□□□ 0.23
SQLE-205ENST00000521232 IZUMO3Q5VZ72 239 aa16.47■□□□□ 0.23
SQLE-205ENST00000521232 DCUN1D3Q8IWE4 304 aa16.47■□□□□ 0.23
SQLE-205ENST00000521232 DSELQ8IZU8 1212 aa16.47■□□□□ 0.23
SQLE-205ENST00000521232 C19orf47Q8N9M1 422 aaKnown RBP16.47■□□□□ 0.23
SQLE-205ENST00000521232 CFAP61Q8NHU2 1237 aa16.47■□□□□ 0.23
SQLE-205ENST00000521232 SEC14L1Q92503 715 aa16.47■□□□□ 0.23
SQLE-205ENST00000521232 LPGAT1Q92604 370 aa16.47■□□□□ 0.23
SQLE-205ENST00000521232 MR1Q95460 341 aa16.47■□□□□ 0.23
SQLE-205ENST00000521232 RUFY1Q96T51 708 aa16.47■□□□□ 0.23
SQLE-205ENST00000521232 ACTL8Q9H568 366 aa16.47■□□□□ 0.23
SQLE-205ENST00000521232 XAB2Q9HCS7 855 aaKnown RBP16.47■□□□□ 0.23
SQLE-205ENST00000521232 SNX12Q9UMY4 172 aa16.47■□□□□ 0.23
SQLE-205ENST00000521232 FARSAQ9Y285 508 aaKnown RBP16.47■□□□□ 0.23
SQLE-205ENST00000521232 KCNMB2Q9Y691 235 aa16.47■□□□□ 0.23
SQLE-205ENST00000521232 A0A0J9YY10 115 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 FAM237BA0A1B0GVD1 139 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 ISM1B1AKI9 464 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 H3BMH7 237 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 J3QKU1 62 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 PFDN6O15212 129 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 KIF5CO60282 957 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 PHF2O75151 1096 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 PAMP19021 973 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 CYP2A7P20853 494 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 CD9P21926 228 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 PEBP1P30086 187 aaKnown RBP16.46■□□□□ 0.23
SQLE-205ENST00000521232 PKLRP30613 574 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 FMO4P31512 558 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 GABRA4P48169 554 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 FNTAP49354 379 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 EIF3BP55884 814 aaKnown RBP16.46■□□□□ 0.23
SQLE-205ENST00000521232 ITGA1P56199 1179 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 ZIC1Q15915 447 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 OTOAQ7RTW8 1153 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 TMEM135Q86UB9 458 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 TRIM73Q86UV7 250 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 OTUD6BQ8N6M0 293 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 LINC01555Q8NAE3 123 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 GRK7Q8WTQ7 553 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 CLIP3Q96DZ5 547 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 SERPINB12Q96P63 405 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 CHST8Q9H2A9 424 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 ACTR5Q9H9F9 607 aaPredicted RBP16.46■□□□□ 0.23
SQLE-205ENST00000521232 PCMTD2Q9NV79 361 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 POLHQ9Y253 713 aa16.46■□□□□ 0.23
SQLE-205ENST00000521232 HEMK1Q9Y5R4 338 aaPredicted RBP16.46■□□□□ 0.23
SQLE-205ENST00000521232 CDC14CA4D256 554 aa16.45■□□□□ 0.22
SQLE-205ENST00000521232 E7EQ34 232 aa16.45■□□□□ 0.22
SQLE-205ENST00000521232 H3BMM5 538 aa16.45■□□□□ 0.22
SQLE-205ENST00000521232 SUV39H1O43463 412 aa16.45■□□□□ 0.22
SQLE-205ENST00000521232 SLC28A2O43868 658 aa16.45■□□□□ 0.22
SQLE-205ENST00000521232 ESR1P03372 595 aa16.45■□□□□ 0.22
SQLE-205ENST00000521232 RAB40ALP0C0E4 278 aa16.45■□□□□ 0.22
SQLE-205ENST00000521232 OGNP20774 298 aaKnown RBP16.45■□□□□ 0.22
SQLE-205ENST00000521232 UGT8Q16880 541 aa16.45■□□□□ 0.22
SQLE-205ENST00000521232 ANKRD20A4Q4UJ75 823 aa16.45■□□□□ 0.22
SQLE-205ENST00000521232 LCN10Q6JVE6 187 aa16.45■□□□□ 0.22
SQLE-205ENST00000521232 NEPROQ6NW34 567 aa16.45■□□□□ 0.22
SQLE-205ENST00000521232 CASC4Q6P4E1 433 aa16.45■□□□□ 0.22
SQLE-205ENST00000521232 CENPUQ71F23 418 aa16.45■□□□□ 0.22
SQLE-205ENST00000521232 SYVN1Q86TM6 617 aa16.45■□□□□ 0.22
SQLE-205ENST00000521232 CILP2Q8IUL8 1156 aa16.45■□□□□ 0.22
SQLE-205ENST00000521232 DNAJC22Q8N4W6 341 aa16.45■□□□□ 0.22
SQLE-205ENST00000521232 NAT8LQ8N9F0 302 aa16.45■□□□□ 0.22
SQLE-205ENST00000521232 GSDMBQ8TAX9 411 aa16.45■□□□□ 0.22
SQLE-205ENST00000521232 SLC22A18Q96BI1 424 aa16.45■□□□□ 0.22
SQLE-205ENST00000521232 ABHD17AQ96GS6 310 aa16.45■□□□□ 0.22
SQLE-205ENST00000521232 TRMT1Q9NXH9 659 aaKnown RBP16.45■□□□□ 0.22
SQLE-205ENST00000521232 SAMD15Q9P1V8 674 aa16.45■□□□□ 0.22
SQLE-205ENST00000521232 MRFAP1Q9Y605 127 aa16.45■□□□□ 0.22
SQLE-205ENST00000521232 GOLGA6L10A0A0M3HER8 536 aa16.44■□□□□ 0.22
SQLE-205ENST00000521232 ZCWPW2A0A1B0GU75 182 aa16.44■□□□□ 0.22
SQLE-205ENST00000521232 RASGRF2O14827 1237 aa16.44■□□□□ 0.22
SQLE-205ENST00000521232 ZNF185O15231 689 aa16.44■□□□□ 0.22
SQLE-205ENST00000521232 ZNF749O43361 778 aa16.44■□□□□ 0.22
SQLE-205ENST00000521232 HCRTR1O43613 425 aa16.44■□□□□ 0.22
SQLE-205ENST00000521232 C1orf105O95561 183 aa16.44■□□□□ 0.22
SQLE-205ENST00000521232 CAPN1P07384 714 aa16.44■□□□□ 0.22
SQLE-205ENST00000521232 HBQ1P09105 142 aa16.44■□□□□ 0.22
SQLE-205ENST00000521232 MAGEA3P43357 314 aa16.44■□□□□ 0.22
SQLE-205ENST00000521232 RPS18P62269 152 aaKnown RBP16.44■□□□□ 0.22
SQLE-205ENST00000521232 NFKB2Q00653 900 aa16.44■□□□□ 0.22
SQLE-205ENST00000521232 DHX34Q14147 1143 aaKnown RBP16.44■□□□□ 0.22
SQLE-205ENST00000521232 GBX1Q14549 363 aa16.44■□□□□ 0.22
SQLE-205ENST00000521232 TTC23LQ6PF05 361 aa16.44■□□□□ 0.22
SQLE-205ENST00000521232 GPR135Q8IZ08 494 aa16.44■□□□□ 0.22
SQLE-205ENST00000521232 OR2L8Q8NGY9 312 aa16.44■□□□□ 0.22
SQLE-205ENST00000521232 THAP4Q8WY91 577 aa16.44■□□□□ 0.22
SQLE-205ENST00000521232 RAD51AP1Q96B01 352 aa16.44■□□□□ 0.22
SQLE-205ENST00000521232 SIGLEC10Q96LC7 697 aa16.44■□□□□ 0.22
SQLE-205ENST00000521232 DPH2Q9BQC3 489 aaPredicted RBP16.44■□□□□ 0.22
SQLE-205ENST00000521232 TRIM56Q9BRZ2 755 aaKnown RBP16.44■□□□□ 0.22
SQLE-205ENST00000521232 NLNQ9BYT8 704 aa16.44■□□□□ 0.22
SQLE-205ENST00000521232 INTS10Q9NVR2 710 aaKnown RBP16.44■□□□□ 0.22
SQLE-205ENST00000521232 VPS9D1Q9Y2B5 631 aa16.44■□□□□ 0.22
SQLE-205ENST00000521232 CRYL1Q9Y2S2 319 aa16.44■□□□□ 0.22
SQLE-205ENST00000521232 NFS1Q9Y697 457 aa16.44■□□□□ 0.22
SQLE-205ENST00000521232 AP1M2Q9Y6Q5 423 aa16.44■□□□□ 0.22
SQLE-205ENST00000521232 FER1L5A0AVI2 2057 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms