RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 VPS33BQ9H267 617 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 Q9N2K0 584 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 NRBP1Q9UHY1 535 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 ZDHHC2Q9UIJ5 367 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 KCNJ14Q9UNX9 436 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 PCDH11YQ9BZA8 1340 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 STK36Q9NRP7 1315 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 LOC101059948A0A1B0GTJ6 334 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 ZNF197O14709 1029 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 NGFP01138 241 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 APOA4P06727 396 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 CENPBP07199 599 aaPredicted RBP4.69□□□□□ -1.66
SKP1-208ENST00000521216 CD48P09326 243 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 OR52Z1P0C646 297 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 HSPA8P11142 646 aaKnown RBP4.69□□□□□ -1.66
SKP1-208ENST00000521216 TUBB4BP68371 445 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 KCNJ10P78508 379 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 ZNF415Q09FC8 603 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 HYAL1Q12794 435 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 RRS1Q15050 365 aaKnown RBP4.69□□□□□ -1.66
SKP1-208ENST00000521216 KIAA1644Q3SXP7 199 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 SYT14P1Q58G82 188 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 C1orf141Q5JVX7 400 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 CST9LP1Q5W188 147 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 C11orf63Q6NUN7 778 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 FAM198BQ6UWH4 519 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 C15orf39Q6ZRI6 1047 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 NME8Q8N427 588 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 OR11H4Q8NGC9 324 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 SNRNP27Q8WVK2 155 aaKnown RBP4.69□□□□□ -1.66
SKP1-208ENST00000521216 ZNF558Q96NG5 402 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 F2RL3Q96RI0 385 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 SERINC2Q96SA4 455 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 LAT2Q9GZY6 243 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 MIS12Q9H081 205 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 SIX2Q9NPC8 291 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 GKN1Q9NS71 199 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 C5AR2Q9P296 337 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 CFDP1Q9UEE9 299 aaPredicted RBP4.69□□□□□ -1.66
SKP1-208ENST00000521216 LRWD1Q9UFC0 647 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 ABT1Q9ULW3 272 aaKnown RBP4.69□□□□□ -1.66
SKP1-208ENST00000521216 TMED3Q9Y3Q3 217 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 RPS6KL1Q9Y6S9 549 aa4.69□□□□□ -1.66
SKP1-208ENST00000521216 RNASEH1O60930 286 aaKnown RBP4.68□□□□□ -1.66
SKP1-208ENST00000521216 TBX10O75333 385 aa4.68□□□□□ -1.66
SKP1-208ENST00000521216 IGHV2-70P01814 119 aa4.68□□□□□ -1.66
SKP1-208ENST00000521216 RAB40ALP0C0E4 278 aa4.68□□□□□ -1.66
SKP1-208ENST00000521216 PRSS56P0CW18 603 aa4.68□□□□□ -1.66
SKP1-208ENST00000521216 ERVK-10P10266 1014 aa4.68□□□□□ -1.66
SKP1-208ENST00000521216 EFNA1P20827 205 aaPredicted RBP4.68□□□□□ -1.66
SKP1-208ENST00000521216 CA4P22748 312 aa4.68□□□□□ -1.66
SKP1-208ENST00000521216 TCEA1P23193 301 aaKnown RBP4.68□□□□□ -1.66
SKP1-208ENST00000521216 PRKCZQ05513 592 aa4.68□□□□□ -1.66
SKP1-208ENST00000521216 TNIP1Q15025 636 aa4.68□□□□□ -1.66
SKP1-208ENST00000521216 UGP2Q16851 508 aa4.68□□□□□ -1.66
SKP1-208ENST00000521216 ITPRIPL2Q3MIP1 535 aa4.68□□□□□ -1.66
SKP1-208ENST00000521216 ZNF876PQ49A33 203 aa4.68□□□□□ -1.66
SKP1-208ENST00000521216 GTDC1Q4AE62 458 aa4.68□□□□□ -1.66
SKP1-208ENST00000521216 TCP11X2Q5H9J9 407 aa4.68□□□□□ -1.66
SKP1-208ENST00000521216 OTUD3Q5T2D3 398 aaPredicted RBP4.68□□□□□ -1.66
SKP1-208ENST00000521216 GFI1BQ5VTD9 330 aa4.68□□□□□ -1.66
SKP1-208ENST00000521216 NUP54Q7Z3B4 507 aa4.68□□□□□ -1.66
SKP1-208ENST00000521216 RTN4RL2Q86UN3 420 aa4.68□□□□□ -1.66
SKP1-208ENST00000521216 MFN1Q8IWA4 741 aa4.68□□□□□ -1.66
SKP1-208ENST00000521216 EID3Q8N140 333 aa4.68□□□□□ -1.66
SKP1-208ENST00000521216 DHX58Q96C10 678 aa4.68□□□□□ -1.66
SKP1-208ENST00000521216 ZNF653Q96CK0 615 aa4.68□□□□□ -1.66
SKP1-208ENST00000521216 ZNF501Q96CX3 271 aaPredicted RBP4.68□□□□□ -1.66
SKP1-208ENST00000521216 RADILQ96JH8 1075 aa4.68□□□□□ -1.66
SKP1-208ENST00000521216 OR10A4Q9H209 315 aa4.68□□□□□ -1.66
SKP1-208ENST00000521216 SCRT2Q9NQ03 307 aa4.68□□□□□ -1.66
SKP1-208ENST00000521216 A0A1W2PN81 502 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 NEMP2A6NFY4 417 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 TCERG1O14776 1098 aaKnown RBP4.67□□□□□ -1.66
SKP1-208ENST00000521216 ATP6V0E1O15342 81 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 DKC1O60832 514 aaKnown RBP eCLIP4.67□□□□□ -1.66
SKP1-208ENST00000521216 ACSL3O95573 720 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 FRMD6-AS1P0C7T7 363 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 PLA2G4BP0C869 781 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 ERCC2P18074 760 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 ITGA3P26006 1051 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 HOXC8P31273 242 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 CHRNA7P36544 502 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 B3GALT5-AS1P59052 145 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 CDR2Q01850 454 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 RBPJQ06330 500 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 VEZF1Q14119 521 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 ODF4Q2M2E3 257 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 CYP4A22Q5TCH4 519 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 RBPMS2Q6ZRY4 209 aaKnown RBP4.67□□□□□ -1.66
SKP1-208ENST00000521216 SLC16A9Q7RTY1 509 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 MAPKAPK5-AS1Q8N8E1 139 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 PI4KAP1Q8N8J0 262 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 THAP8Q8NA92 274 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 XXYLT1Q8NBI6 393 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 MOB3AQ96BX8 217 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 CFAP57Q96MR6 1250 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 RAD9AQ99638 391 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 BAG1Q99933 345 aaPredicted RBP4.67□□□□□ -1.66
SKP1-208ENST00000521216 SDR39U1Q9NRG7 319 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms