RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 GPC4O75487 556 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 SLCO2B1O94956 709 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 TIAF1O95411 115 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 DLGAP3O95886 979 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 SYF2O95926 243 aaKnown RBP13.71□□□□□ -0.21
VEGFA-221ENST00000520265 MT-ND3P03897 115 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 ERVK-10P10266 1014 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 PKLRP30613 574 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 STAT5AP42229 794 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 RAB28P51157 221 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 ARL4CP56559 192 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 ABHD18Q0P651 414 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 CUL1Q13616 776 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 HIF1AQ16665 826 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.71□□□□□ -0.21
VEGFA-221ENST00000520265 SOWAHCQ53LP3 525 aaPredicted RBP13.71□□□□□ -0.21
VEGFA-221ENST00000520265 SPANXN3Q5MJ09 141 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 TMEM135Q86UB9 458 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 ANKMY2Q8IV38 441 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 FAM20CQ8IXL6 584 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 CARFQ8N187 725 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 AGGF1Q8N302 714 aaeCLIP13.71□□□□□ -0.21
VEGFA-221ENST00000520265 C19orf47Q8N9M1 422 aaKnown RBP13.71□□□□□ -0.21
VEGFA-221ENST00000520265 EXTL1Q92935 676 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 SIGLEC10Q96LC7 697 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 BIRC8Q96P09 236 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 BBC3Q96PG8 261 aaPredicted RBP13.71□□□□□ -0.21
VEGFA-221ENST00000520265 DPH5Q9H2P9 285 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 KCND1Q9NSA2 647 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 ABCF3Q9NUQ8 709 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 OR6C2Q9NZP2 312 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 ZC3H7BQ9UGR2 993 aaKnown RBP13.71□□□□□ -0.21
VEGFA-221ENST00000520265 FBXO5Q9UKT4 447 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 SNX24Q9Y343 169 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 MRFAP1Q9Y605 127 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 ZFYVE26Q68DK2 2539 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 A0A0J9YY10 115 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 KRT87PA6NCN2 255 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 ATXN7O15265 892 aaPredicted RBP13.7□□□□□ -0.22
VEGFA-221ENST00000520265 CPNE3O75131 537 aaKnown RBP13.7□□□□□ -0.22
VEGFA-221ENST00000520265 TTC4O95801 387 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 S1PR4O95977 384 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 PRB1P04280 392 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 ELK3P41970 407 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 MAGEA3P43357 314 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 COL9A2Q14055 689 aaPredicted RBP13.7□□□□□ -0.22
VEGFA-221ENST00000520265 LY6DQ14210 128 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 MSS51Q4VC12 460 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 ACSBG2Q5FVE4 666 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 CAPN12Q6ZSI9 719 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 BPHLQ86WA6 291 aaPredicted RBP13.7□□□□□ -0.22
VEGFA-221ENST00000520265 GPR135Q8IZ08 494 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 MAGEC3Q8TD91 643 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 STARD8Q92502 1023 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 ZNF592Q92610 1267 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 MR1Q95460 341 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 RAD51AP1Q96B01 352 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 C16orf45Q96MC5 204 aaPredicted RBP13.7□□□□□ -0.22
VEGFA-221ENST00000520265 TRAPPC9Q96Q05 1148 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 OR2A14Q96R47 310 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 NDNQ99608 321 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 EBNA1BP2Q99848 306 aaKnown RBP13.7□□□□□ -0.22
VEGFA-221ENST00000520265 NAT9Q9BTE0 207 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 RAB11FIP5Q9BXF6 653 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 SERTAD3Q9UJW9 196 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 PADI1Q9ULC6 663 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 BTRCQ9Y297 605 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 MRPS18BQ9Y676 258 aaKnown RBP13.7□□□□□ -0.22
VEGFA-221ENST00000520265 FAM169AQ9Y6X4 670 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 CHD6Q8TD26 2715 aa13.7□□□□□ -0.22
VEGFA-221ENST00000520265 RASGRF2O14827 1237 aa13.69□□□□□ -0.22
VEGFA-221ENST00000520265 FANCGO15287 622 aa13.69□□□□□ -0.22
VEGFA-221ENST00000520265 VPS26AO75436 327 aa13.69□□□□□ -0.22
VEGFA-221ENST00000520265 SEC31AO94979 1220 aaKnown RBP13.69□□□□□ -0.22
VEGFA-221ENST00000520265 C1orf105O95561 183 aa13.69□□□□□ -0.22
VEGFA-221ENST00000520265 TCN2P20062 427 aa13.69□□□□□ -0.22
VEGFA-221ENST00000520265 CCNFP41002 786 aa13.69□□□□□ -0.22
VEGFA-221ENST00000520265 CARSP49589 748 aaKnown RBP13.69□□□□□ -0.22
VEGFA-221ENST00000520265 ETF1P62495 437 aaKnown RBP13.69□□□□□ -0.22
VEGFA-221ENST00000520265 CALCOCO2Q13137 446 aa13.69□□□□□ -0.22
VEGFA-221ENST00000520265 MAP7Q14244 749 aa13.69□□□□□ -0.22
VEGFA-221ENST00000520265 KIR2DS3Q14952 304 aa13.69□□□□□ -0.22
VEGFA-221ENST00000520265 SF1Q15637 639 aaKnown RBP13.69□□□□□ -0.22
VEGFA-221ENST00000520265 KYNUQ16719 465 aa13.69□□□□□ -0.22
VEGFA-221ENST00000520265 KLHL38Q2WGJ6 581 aa13.69□□□□□ -0.22
VEGFA-221ENST00000520265 CCSMST1Q4G0I0 132 aa13.69□□□□□ -0.22
VEGFA-221ENST00000520265 PRAMEF17Q5VTA0 474 aa13.69□□□□□ -0.22
VEGFA-221ENST00000520265 LMNTD2Q8IXW0 634 aa13.69□□□□□ -0.22
VEGFA-221ENST00000520265 OR8K5Q8NH50 307 aa13.69□□□□□ -0.22
VEGFA-221ENST00000520265 CT55Q8WUE5 264 aa13.69□□□□□ -0.22
VEGFA-221ENST00000520265 ZNF501Q96CX3 271 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-221ENST00000520265 GPR21Q99679 349 aa13.69□□□□□ -0.22
VEGFA-221ENST00000520265 PITPNM3Q9BZ71 974 aa13.69□□□□□ -0.22
VEGFA-221ENST00000520265 SEMA5BQ9P283 1151 aa13.69□□□□□ -0.22
VEGFA-221ENST00000520265 GALPQ9UBC7 116 aa13.69□□□□□ -0.22
VEGFA-221ENST00000520265 IL17BQ9UHF5 180 aa13.69□□□□□ -0.22
VEGFA-221ENST00000520265 TRMT6Q9UJA5 497 aaKnown RBP13.69□□□□□ -0.22
VEGFA-221ENST00000520265 SSUH2Q9Y2M2 353 aa13.69□□□□□ -0.22
VEGFA-221ENST00000520265 KLHL20Q9Y2M5 609 aa13.69□□□□□ -0.22
VEGFA-221ENST00000520265 PCDHB3Q9Y5E6 796 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms