RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 RALAP11233 206 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 ZNF18P17022 549 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 AOC1P19801 751 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 CD72P21854 359 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 ATP5C1P36542 298 aaKnown RBP7.01□□□□□ -1.29
SDCBP-208ENST00000520228 IFNAR2P48551 515 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 VCPP55072 806 aaKnown RBP7.01□□□□□ -1.29
SDCBP-208ENST00000520228 ARHGAP8P85298 464 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 SRSF1Q07955 248 aaKnown RBP eCLIP7.01□□□□□ -1.29
SDCBP-208ENST00000520228 MTF1Q14872 753 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 ZNF77Q15935 545 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 ITPRIPL2Q3MIP1 535 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 RAB41Q5JT25 222 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 WDR45BQ5MNZ6 344 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 C10orf120Q5SQS8 335 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 AADACL2Q6P093 401 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 CCDC186Q7Z3E2 898 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 SCD5Q86SK9 330 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 PIP4P1Q86T03 277 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 TADA2BQ86TJ2 420 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 TMTC1Q8IUR5 882 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 SIX6OS1Q8N1H7 587 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 TMEM217Q8N7C4 229 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 TMEM105Q8N8V8 129 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 SLC35F5Q8WV83 523 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 FAM3CQ92520 227 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 SHC3Q92529 594 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 SECISBP2LQ93073 1101 aaKnown RBP7.01□□□□□ -1.29
SDCBP-208ENST00000520228 MSANTD3Q96H12 275 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 TBATAQ96M53 351 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 BPIFA3Q9BQP9 254 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 TUBB6Q9BUF5 446 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 CTDSP1Q9GZU7 261 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 EBF3Q9H4W6 596 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 C8orf33Q9H7E9 229 aaPredicted RBP7.01□□□□□ -1.29
SDCBP-208ENST00000520228 SPAG4Q9NPE6 437 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 OSER1Q9NX31 292 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 DUS2Q9NX74 493 aaKnown RBP7.01□□□□□ -1.29
SDCBP-208ENST00000520228 GTSE1Q9NYZ3 720 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 CLIC5Q9NZA1 410 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 LIMA1Q9UHB6 759 aaKnown RBP7.01□□□□□ -1.29
SDCBP-208ENST00000520228 UTS2RQ9UKP6 389 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 SLC8A2Q9UPR5 921 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 TSC2P49815 1807 aa7.01□□□□□ -1.29
SDCBP-208ENST00000520228 FAM90A7PA6NKC0 464 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 FAM90A22PA8MWA6 464 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 FAM90A12PA8MX19 464 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 FAM90A23PA8MXZ1 464 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 SPECC1L-ADORA2AF8WAN1 911 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 SLC9A3R1O14745 358 aaPredicted RBP7□□□□□ -1.29
SDCBP-208ENST00000520228 PRPF4O43172 522 aaKnown RBP eCLIP7□□□□□ -1.29
SDCBP-208ENST00000520228 HOXC11O43248 304 aaPredicted RBP7□□□□□ -1.29
SDCBP-208ENST00000520228 MSI1O43347 362 aaKnown RBP7□□□□□ -1.29
SDCBP-208ENST00000520228 TOP3BO95985 862 aaKnown RBP7□□□□□ -1.29
SDCBP-208ENST00000520228 DCNP07585 359 aaKnown RBP7□□□□□ -1.29
SDCBP-208ENST00000520228 RARGP13631 454 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 ATP1A3P13637 1013 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 UCHL3P15374 230 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 GSTM2P28161 218 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 GJC1P36383 396 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 ABCG1P45844 678 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 RGS7P49802 495 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 YWHAGP61981 247 aaKnown RBP eCLIP7□□□□□ -1.29
SDCBP-208ENST00000520228 ZXDBP98169 803 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 UBXN1Q04323 297 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 ADIGQ0VDE8 80 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 RUNX3Q13761 415 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 DRAP1Q14919 205 aaPredicted RBP7□□□□□ -1.29
SDCBP-208ENST00000520228 ASPHD1Q5U4P2 390 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 ATG16L1Q676U5 607 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 PM20D1Q6GTS8 502 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 PMF1Q6P1K2 205 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 RSRC2Q7L4I2 434 aaKnown RBP7□□□□□ -1.29
SDCBP-208ENST00000520228 RALGPS2Q86X27 583 aaPredicted RBP7□□□□□ -1.29
SDCBP-208ENST00000520228 DHX40Q8IX18 779 aaKnown RBP7□□□□□ -1.29
SDCBP-208ENST00000520228 DDIASQ8IXT1 998 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 FAM71AQ8IYT1 594 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 ZNF606Q8WXB4 792 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 MSI2Q96DH6 328 aaKnown RBP7□□□□□ -1.29
SDCBP-208ENST00000520228 HSFY1Q96LI6 401 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 FUCA2Q9BTY2 467 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 ULBP1Q9BZM6 244 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 HSD3B7Q9H2F3 369 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 LINC00597Q9H2U6 94 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 STN1Q9H668 368 aaKnown RBP7□□□□□ -1.29
SDCBP-208ENST00000520228 NMUR1Q9HB89 426 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 ZNF304Q9HCX3 659 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 LTB4R2Q9NPC1 389 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 ACP6Q9NPH0 428 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 HPS4Q9NQG7 708 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 CNGB3Q9NQW8 809 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 FAM207AQ9NSI2 230 aaPredicted RBP7□□□□□ -1.29
SDCBP-208ENST00000520228 UPB1Q9UBR1 384 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 NDRG2Q9UN36 371 aaKnown RBP7□□□□□ -1.29
SDCBP-208ENST00000520228 MTF2Q9Y483 593 aaPredicted RBP7□□□□□ -1.29
SDCBP-208ENST00000520228 ZDBF2Q9HCK1 2354 aa7□□□□□ -1.29
SDCBP-208ENST00000520228 TECTAO75443 2155 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 A0A1B0GVC2 190 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 DNAJC9-AS1A6NH13 148 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 SHISA7A6NL88 538 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms