RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 C12orf66Q96MD2 445 aa5.96□□□□□ -1.46
MRPS28-203ENST00000518371 SERPINB12Q96P63 405 aa5.96□□□□□ -1.46
MRPS28-203ENST00000518371 FERD3LQ96RJ6 166 aa5.96□□□□□ -1.46
MRPS28-203ENST00000518371 KRT12Q99456 494 aa5.96□□□□□ -1.46
MRPS28-203ENST00000518371 DPYSL5Q9BPU6 564 aa5.96□□□□□ -1.46
MRPS28-203ENST00000518371 TSSK1BQ9BXA7 367 aa5.96□□□□□ -1.46
MRPS28-203ENST00000518371 TBC1D10AQ9BXI6 508 aa5.96□□□□□ -1.46
MRPS28-203ENST00000518371 TRIM31Q9BZY9 425 aa5.96□□□□□ -1.46
MRPS28-203ENST00000518371 POLR1BQ9H9Y6 1135 aa5.96□□□□□ -1.46
MRPS28-203ENST00000518371 MRM3Q9HC36 420 aaKnown RBP5.96□□□□□ -1.46
MRPS28-203ENST00000518371 SLC40A1Q9NP59 571 aa5.96□□□□□ -1.46
MRPS28-203ENST00000518371 PRDM7Q9NQW5 492 aa5.96□□□□□ -1.46
MRPS28-203ENST00000518371 TREX1Q9NSU2 369 aa5.96□□□□□ -1.46
MRPS28-203ENST00000518371 POT1Q9NUX5 634 aa5.96□□□□□ -1.46
MRPS28-203ENST00000518371 IMP3Q9NV31 184 aaKnown RBP5.96□□□□□ -1.46
MRPS28-203ENST00000518371 ZNF624Q9P2J8 865 aaPredicted RBP5.96□□□□□ -1.46
MRPS28-203ENST00000518371 WDR37Q9Y2I8 494 aa5.96□□□□□ -1.46
MRPS28-203ENST00000518371 PRSS21Q9Y6M0 314 aa5.96□□□□□ -1.46
MRPS28-203ENST00000518371 COLEC10Q9Y6Z7 277 aa5.96□□□□□ -1.46
MRPS28-203ENST00000518371 TPRP12270 2363 aaKnown RBP5.96□□□□□ -1.46
MRPS28-203ENST00000518371 ASXL3Q9C0F0 2248 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 PRAMEF33A0A0G2JMD5 474 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 FAM237BA0A1B0GVD1 139 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 UBA6A0AVT1 1052 aaPredicted RBP5.95□□□□□ -1.46
MRPS28-203ENST00000518371 A8MU76 341 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 GOLGA8KD6RF30 607 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 GOLGA8TH3BQL2 631 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 NDC80O14777 642 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 LIN7AO14910 233 aaPredicted RBP5.95□□□□□ -1.46
MRPS28-203ENST00000518371 SGTAO43765 313 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 BRINP1O60477 761 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 URI1O94763 535 aaPredicted RBP5.95□□□□□ -1.46
MRPS28-203ENST00000518371 UBXN7O94888 489 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 TNFSF15O95150 251 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 TUBB4AP04350 444 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 JMJD7P0C870 316 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 TYRP1P17643 537 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 CFPP27918 469 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 CCKBRP32239 447 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 CSTF2P33240 577 aaKnown RBP eCLIP5.95□□□□□ -1.46
MRPS28-203ENST00000518371 LIMK2P53671 638 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 CSE1LP55060 971 aaKnown RBP5.95□□□□□ -1.46
MRPS28-203ENST00000518371 MRPS25P82663 173 aaKnown RBP5.95□□□□□ -1.46
MRPS28-203ENST00000518371 ZFP36L1Q07352 338 aaKnown RBP5.95□□□□□ -1.46
MRPS28-203ENST00000518371 RPA4Q13156 261 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 EIF3IQ13347 325 aaKnown RBP5.95□□□□□ -1.46
MRPS28-203ENST00000518371 SQSTM1Q13501 440 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 GPR18Q14330 331 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 SEMA3AQ14563 771 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 NR1D2Q14995 579 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 BBS9Q3SYG4 887 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 ANKRD20A4Q4UJ75 823 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 SYTL3Q4VX76 610 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 DNAJC21Q5F1R6 531 aaKnown RBP5.95□□□□□ -1.46
MRPS28-203ENST00000518371 RNASEH2BQ5TBB1 312 aaKnown RBP5.95□□□□□ -1.46
MRPS28-203ENST00000518371 ARMC3Q5W041 872 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 PTRHD1Q6GMV3 140 aaKnown RBP5.95□□□□□ -1.46
MRPS28-203ENST00000518371 KIAA0930Q6ICG6 404 aaPredicted RBP5.95□□□□□ -1.46
MRPS28-203ENST00000518371 NEPROQ6NW34 567 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 ARMC6Q6NXE6 501 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 KLHL35Q6PF15 583 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 LRFN4Q6PJG9 635 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 PACS1Q6VY07 963 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 RAB11FIP2Q7L804 512 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 MAATS1Q7Z4T9 603 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 ATG4DQ86TL0 474 aaPredicted RBP5.95□□□□□ -1.46
MRPS28-203ENST00000518371 HOOK3Q86VS8 718 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 PLXDC1Q8IUK5 500 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 SPACA3Q8IXA5 215 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 PDIK1LQ8N165 341 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 MPP5Q8N3R9 675 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 LILRA3Q8N6C8 439 aaPredicted RBP5.95□□□□□ -1.46
MRPS28-203ENST00000518371 BBOF1Q8ND07 529 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 PHC3Q8NDX5 983 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 SPATA4Q8NEY3 305 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 OR4D9Q8NGE8 314 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 GSDMBQ8TAX9 411 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 TMEM159Q96B96 161 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 STAMBPL1Q96FJ0 436 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 LIN37Q96GY3 246 aaPredicted RBP5.95□□□□□ -1.46
MRPS28-203ENST00000518371 SNF8Q96H20 258 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 SIGLEC10Q96LC7 697 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 C16orf45Q96MC5 204 aaPredicted RBP5.95□□□□□ -1.46
MRPS28-203ENST00000518371 FRMD6Q96NE9 622 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 FCRL3Q96P31 734 aaPredicted RBP5.95□□□□□ -1.46
MRPS28-203ENST00000518371 CMKLR1Q99788 373 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 NUDT22Q9BRQ3 303 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 TRIM51Q9BSJ1 452 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 CARD6Q9BX69 1037 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 EPB41L1Q9H4G0 881 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 COG4Q9H9E3 785 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 UCK1Q9HA47 277 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 MARCH4Q9P2E8 410 aaPredicted RBP5.95□□□□□ -1.46
MRPS28-203ENST00000518371 PISDQ9UG56 409 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 KLHL3Q9UH77 587 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 SATB2Q9UPW6 733 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 SNX24Q9Y343 169 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 LOXL2Q9Y4K0 774 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 HEBP2Q9Y5Z4 205 aa5.95□□□□□ -1.46
MRPS28-203ENST00000518371 CFAP20Q9Y6A4 193 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms