RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 TCTN2Q96GX1 697 aa17.06■□□□□ 0.32
SFXN1-212ENST00000515791 NLNQ9BYT8 704 aa17.06■□□□□ 0.32
SFXN1-212ENST00000515791 EPN3Q9H201 632 aa17.06■□□□□ 0.32
SFXN1-212ENST00000515791 HOMER3Q9NSC5 361 aa17.06■□□□□ 0.32
SFXN1-212ENST00000515791 SERTAD3Q9UJW9 196 aa17.06■□□□□ 0.32
SFXN1-212ENST00000515791 TLK1Q9UKI8 766 aa17.06■□□□□ 0.32
SFXN1-212ENST00000515791 TTC7AQ9ULT0 858 aaPredicted RBP17.06■□□□□ 0.32
SFXN1-212ENST00000515791 SOX13Q9UN79 622 aa17.06■□□□□ 0.32
SFXN1-212ENST00000515791 A0A0J9YY10 115 aa17.05■□□□□ 0.32
SFXN1-212ENST00000515791 E7EQ34 232 aa17.05■□□□□ 0.32
SFXN1-212ENST00000515791 AP3B1O00203 1094 aa17.05■□□□□ 0.32
SFXN1-212ENST00000515791 PRICKLE3O43900 615 aaPredicted RBP17.05■□□□□ 0.32
SFXN1-212ENST00000515791 AVILO75366 819 aa17.05■□□□□ 0.32
SFXN1-212ENST00000515791 DNAJB5O75953 348 aa17.05■□□□□ 0.32
SFXN1-212ENST00000515791 KLK3P07288 261 aaPredicted RBP17.05■□□□□ 0.32
SFXN1-212ENST00000515791 PPARGP37231 505 aaPredicted RBP17.05■□□□□ 0.32
SFXN1-212ENST00000515791 RAB28P51157 221 aa17.05■□□□□ 0.32
SFXN1-212ENST00000515791 TLE1Q04724 770 aa17.05■□□□□ 0.32
SFXN1-212ENST00000515791 GBX1Q14549 363 aa17.05■□□□□ 0.32
SFXN1-212ENST00000515791 KIR2DS3Q14952 304 aa17.05■□□□□ 0.32
SFXN1-212ENST00000515791 TRIP13Q15645 432 aaPredicted RBP17.05■□□□□ 0.32
SFXN1-212ENST00000515791 TYSND1Q2T9J0 566 aa17.05■□□□□ 0.32
SFXN1-212ENST00000515791 LACTB2Q53H82 288 aaPredicted RBP17.05■□□□□ 0.32
SFXN1-212ENST00000515791 ANKRD22Q5VYY1 191 aa17.05■□□□□ 0.32
SFXN1-212ENST00000515791 TCTN3Q6NUS6 607 aa17.05■□□□□ 0.32
SFXN1-212ENST00000515791 UNC5DQ6UXZ4 953 aa17.05■□□□□ 0.32
SFXN1-212ENST00000515791 FAM20CQ8IXL6 584 aa17.05■□□□□ 0.32
SFXN1-212ENST00000515791 SYTL1Q8IYJ3 562 aa17.05■□□□□ 0.32
SFXN1-212ENST00000515791 ENDOVQ8N8Q3 282 aaKnown RBP17.05■□□□□ 0.32
SFXN1-212ENST00000515791 THAP4Q8WY91 577 aa17.05■□□□□ 0.32
SFXN1-212ENST00000515791 SEC14L1Q92503 715 aa17.05■□□□□ 0.32
SFXN1-212ENST00000515791 CLIP3Q96DZ5 547 aa17.05■□□□□ 0.32
SFXN1-212ENST00000515791 MS4A14Q96JA4 679 aa17.05■□□□□ 0.32
SFXN1-212ENST00000515791 TRIM56Q9BRZ2 755 aaKnown RBP17.05■□□□□ 0.32
SFXN1-212ENST00000515791 SPRTNQ9H040 489 aaPredicted RBP17.05■□□□□ 0.32
SFXN1-212ENST00000515791 CLMPQ9H6B4 373 aa17.05■□□□□ 0.32
SFXN1-212ENST00000515791 ANAPC5Q9UJX4 755 aa17.05■□□□□ 0.32
SFXN1-212ENST00000515791 ANAPC2Q9UJX6 822 aa17.05■□□□□ 0.32
SFXN1-212ENST00000515791 TCFL5Q9UL49 500 aa17.05■□□□□ 0.32
SFXN1-212ENST00000515791 MAN2B2Q9Y2E5 1009 aa17.05■□□□□ 0.32
SFXN1-212ENST00000515791 F8W8V4 182 aa17.04■□□□□ 0.32
SFXN1-212ENST00000515791 RFPL1O75677 317 aa17.04■□□□□ 0.32
SFXN1-212ENST00000515791 TMEM63AO94886 807 aa17.04■□□□□ 0.32
SFXN1-212ENST00000515791 VAPBO95292 243 aa17.04■□□□□ 0.32
SFXN1-212ENST00000515791 APOA4P06727 396 aa17.04■□□□□ 0.32
SFXN1-212ENST00000515791 CYP2A7P20853 494 aa17.04■□□□□ 0.32
SFXN1-212ENST00000515791 CD9P21926 228 aa17.04■□□□□ 0.32
SFXN1-212ENST00000515791 CASRP41180 1078 aa17.04■□□□□ 0.32
SFXN1-212ENST00000515791 KCNC4Q03721 635 aa17.04■□□□□ 0.32
SFXN1-212ENST00000515791 CYP1B1Q16678 543 aa17.04■□□□□ 0.32
SFXN1-212ENST00000515791 DEFB110Q30KQ9 67 aa17.04■□□□□ 0.32
SFXN1-212ENST00000515791 PTCHD3Q3KNS1 767 aa17.04■□□□□ 0.32
SFXN1-212ENST00000515791 CPZQ66K79 652 aa17.04■□□□□ 0.32
SFXN1-212ENST00000515791 LRRC6Q86X45 466 aa17.04■□□□□ 0.32
SFXN1-212ENST00000515791 REXO1L1PQ8IX06 675 aa17.04■□□□□ 0.32
SFXN1-212ENST00000515791 LPGAT1Q92604 370 aa17.04■□□□□ 0.32
SFXN1-212ENST00000515791 IL17FQ96PD4 163 aa17.04■□□□□ 0.32
SFXN1-212ENST00000515791 TSSK1BQ9BXA7 367 aa17.04■□□□□ 0.32
SFXN1-212ENST00000515791 MLXIPLQ9NP71 852 aa17.04■□□□□ 0.32
SFXN1-212ENST00000515791 CIDEBQ9UHD4 219 aa17.04■□□□□ 0.32
SFXN1-212ENST00000515791 JRKLQ9Y4A0 524 aa17.04■□□□□ 0.32
SFXN1-212ENST00000515791 NFS1Q9Y697 457 aa17.04■□□□□ 0.32
SFXN1-212ENST00000515791 FLNBO75369 2602 aaKnown RBP17.03■□□□□ 0.32
SFXN1-212ENST00000515791 GOLGA8KD6RF30 607 aa17.03■□□□□ 0.32
SFXN1-212ENST00000515791 MKRN2OSH3BPM6 223 aa17.03■□□□□ 0.32
SFXN1-212ENST00000515791 GOLGA8TH3BQL2 631 aa17.03■□□□□ 0.32
SFXN1-212ENST00000515791 KLF7O75840 302 aaPredicted RBP17.03■□□□□ 0.32
SFXN1-212ENST00000515791 CBSLP0DN79 551 aa17.03■□□□□ 0.32
SFXN1-212ENST00000515791 CBSP35520 551 aa17.03■□□□□ 0.32
SFXN1-212ENST00000515791 ADARP55265 1226 aaKnown RBP17.03■□□□□ 0.32
SFXN1-212ENST00000515791 GPS1Q13098 491 aa17.03■□□□□ 0.32
SFXN1-212ENST00000515791 CCSMST1Q4G0I0 132 aa17.03■□□□□ 0.32
SFXN1-212ENST00000515791 KIAA0930Q6ICG6 404 aaPredicted RBP17.03■□□□□ 0.32
SFXN1-212ENST00000515791 RHBDD2Q6NTF9 364 aa17.03■□□□□ 0.32
SFXN1-212ENST00000515791 DCUN1D3Q8IWE4 304 aa17.03■□□□□ 0.32
SFXN1-212ENST00000515791 AGGF1Q8N302 714 aaeCLIP17.03■□□□□ 0.32
SFXN1-212ENST00000515791 OR2L8Q8NGY9 312 aa17.03■□□□□ 0.32
SFXN1-212ENST00000515791 GBP5Q96PP8 586 aa17.03■□□□□ 0.32
SFXN1-212ENST00000515791 PANX3Q96QZ0 392 aa17.03■□□□□ 0.32
SFXN1-212ENST00000515791 ENAMQ9NRM1 1142 aa17.03■□□□□ 0.32
SFXN1-212ENST00000515791 GNPTGQ9UJJ9 305 aa17.03■□□□□ 0.32
SFXN1-212ENST00000515791 KLHL20Q9Y2M5 609 aa17.03■□□□□ 0.32
SFXN1-212ENST00000515791 SEC16AO15027 2179 aa17.03■□□□□ 0.32
SFXN1-212ENST00000515791 MED13Q9UHV7 2174 aa17.03■□□□□ 0.32
SFXN1-212ENST00000515791 COL12A1Q99715 3063 aa17.02■□□□□ 0.32
SFXN1-212ENST00000515791 ISM1B1AKI9 464 aa17.02■□□□□ 0.32
SFXN1-212ENST00000515791 RASGRF2O14827 1237 aa17.02■□□□□ 0.32
SFXN1-212ENST00000515791 NDUFS3O75489 264 aa17.02■□□□□ 0.32
SFXN1-212ENST00000515791 C1orf105O95561 183 aa17.02■□□□□ 0.32
SFXN1-212ENST00000515791 KRT14P02533 472 aa17.02■□□□□ 0.32
SFXN1-212ENST00000515791 MAGP20916 626 aa17.02■□□□□ 0.32
SFXN1-212ENST00000515791 COILP38432 576 aaPredicted RBP17.02■□□□□ 0.32
SFXN1-212ENST00000515791 MAGEA3P43357 314 aa17.02■□□□□ 0.32
SFXN1-212ENST00000515791 VPS41P49754 854 aa17.02■□□□□ 0.32
SFXN1-212ENST00000515791 NCF4Q15080 339 aa17.02■□□□□ 0.32
SFXN1-212ENST00000515791 ARMC3Q5W041 872 aa17.02■□□□□ 0.32
SFXN1-212ENST00000515791 FCRL6Q6DN72 434 aa17.02■□□□□ 0.32
SFXN1-212ENST00000515791 PTRHD1Q6GMV3 140 aaKnown RBP17.02■□□□□ 0.32
SFXN1-212ENST00000515791 CENPUQ71F23 418 aa17.02■□□□□ 0.32
SFXN1-212ENST00000515791 TMEM151BQ8IW70 566 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms