RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 EPN3Q9H201 632 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 CLMPQ9H6B4 373 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 ACTR5Q9H9F9 607 aaPredicted RBP10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 FAM60AQ9NP50 221 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 ZNF71Q9NQZ8 489 aaPredicted RBP10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 BFARQ9NZS9 450 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 GNPTGQ9UJJ9 305 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 SERTAD3Q9UJW9 196 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 ANAPC2Q9UJX6 822 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 FARSAQ9Y285 508 aaKnown RBP10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 TP53TG5Q9Y2B4 290 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 MYO18BQ8IUG5 2567 aa10.09□□□□□ -0.79
HMGXB3-205ENST00000514469 ZNF749O43361 778 aa10.09□□□□□ -0.79
HMGXB3-205ENST00000514469 HCRTR1O43613 425 aa10.09□□□□□ -0.79
HMGXB3-205ENST00000514469 RPN2P04844 631 aa10.09□□□□□ -0.79
HMGXB3-205ENST00000514469 CASRP41180 1078 aa10.09□□□□□ -0.79
HMGXB3-205ENST00000514469 TLE1Q04724 770 aa10.09□□□□□ -0.79
HMGXB3-205ENST00000514469 TMED2Q15363 201 aa10.09□□□□□ -0.79
HMGXB3-205ENST00000514469 TRIP13Q15645 432 aaPredicted RBP10.09□□□□□ -0.79
HMGXB3-205ENST00000514469 KCTD19Q17RG1 926 aaPredicted RBP10.09□□□□□ -0.79
HMGXB3-205ENST00000514469 TYSND1Q2T9J0 566 aa10.09□□□□□ -0.79
HMGXB3-205ENST00000514469 CTSL3PQ5NE16 218 aa10.09□□□□□ -0.79
HMGXB3-205ENST00000514469 CPZQ66K79 652 aa10.09□□□□□ -0.79
HMGXB3-205ENST00000514469 PTRHD1Q6GMV3 140 aaKnown RBP10.09□□□□□ -0.79
HMGXB3-205ENST00000514469 KIAA0930Q6ICG6 404 aaPredicted RBP10.09□□□□□ -0.79
HMGXB3-205ENST00000514469 TCTN3Q6NUS6 607 aa10.09□□□□□ -0.79
HMGXB3-205ENST00000514469 MFSD3Q96ES6 412 aa10.09□□□□□ -0.79
HMGXB3-205ENST00000514469 PANX3Q96QZ0 392 aa10.09□□□□□ -0.79
HMGXB3-205ENST00000514469 DPH2Q9BQC3 489 aaPredicted RBP10.09□□□□□ -0.79
HMGXB3-205ENST00000514469 NLNQ9BYT8 704 aa10.09□□□□□ -0.79
HMGXB3-205ENST00000514469 TRIM55Q9BYV6 548 aa10.09□□□□□ -0.79
HMGXB3-205ENST00000514469 TLK1Q9UKI8 766 aa10.09□□□□□ -0.79
HMGXB3-205ENST00000514469 TCFL5Q9UL49 500 aa10.09□□□□□ -0.79
HMGXB3-205ENST00000514469 TTC7AQ9ULT0 858 aaPredicted RBP10.09□□□□□ -0.79
HMGXB3-205ENST00000514469 SOX13Q9UN79 622 aa10.09□□□□□ -0.79
HMGXB3-205ENST00000514469 ISM1B1AKI9 464 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 K7EM74 188 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 RASGRF2O14827 1237 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 NDUFS3O75489 264 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 DNAJB5O75953 348 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 OR2B3O76000 313 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 TMEM63AO94886 807 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 VAPBO95292 243 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 HBQ1P09105 142 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 NR1D1P20393 614 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 OGNP20774 298 aaKnown RBP10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 GCGRP47871 477 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 KCNC4Q03721 635 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 KLRB1Q12918 225 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 GPS1Q13098 491 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 GBX1Q14549 363 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 NCF4Q15080 339 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 CYP1B1Q16678 543 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 PTCHD3Q3KNS1 767 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 RNF187Q5TA31 235 aaPredicted RBP10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 ANKRD22Q5VYY1 191 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 MRNIPQ6NTE8 343 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 RHBDD2Q6NTF9 364 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 CES3Q6UWW8 571 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 GPR135Q8IZ08 494 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 DNAJC22Q8N4W6 341 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 OR2L8Q8NGY9 312 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 LPGAT1Q92604 370 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 N4BP2L2Q92802 583 aaPredicted RBP10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 PBKQ96KB5 322 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 BIRC8Q96P09 236 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 RAB11FIP5Q9BXF6 653 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 SNX7Q9UNH6 387 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 JRKLQ9Y4A0 524 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 AP1M2Q9Y6Q5 423 aa10.08□□□□□ -0.8
HMGXB3-205ENST00000514469 ARGFXA6NJG6 315 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 C9J4A7 227 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 GOLGA8KD6RF30 607 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 GOLGA8TH3BQL2 631 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 KPNA5O15131 536 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 ZSCAN9O15535 394 aaPredicted RBP10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 AVILO75366 819 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 C1orf105O95561 183 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 S1PR4O95977 384 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 KRT14P02533 472 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 PDGFAP04085 211 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 CTSBP07858 339 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 MLNP12872 115 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 MAGP20916 626 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 CD9P21926 228 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 ATP5DP30049 168 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 PTGIRP43119 386 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 VPS41P49754 854 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 ADARP55265 1226 aaKnown RBP10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 EIF3BP55884 814 aaKnown RBP10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 SARNPP82979 210 aaKnown RBP10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 FAM69BQ5VUD6 431 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 ASB18Q6ZVZ8 466 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 OTOAQ7RTW8 1153 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 CAND1Q86VP6 1230 aaKnown RBP10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 OTUD6BQ8N6M0 293 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 LMNTD1Q8N9Z9 388 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 CFAP61Q8NHU2 1237 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 PROKR1Q8TCW9 393 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 SLC22A18Q96BI1 424 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms