RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 RASSF9O75901 435 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 C1QAP02745 245 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 AHSGP02765 367 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 F7P08709 466 aaPredicted RBP9.39□□□□□ -0.91
RNF4-221ENST00000513643 EBLN1P0CF75 366 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 ST6GAL1P15907 406 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 UGT2B7P16662 529 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 ELK3P41970 407 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 ACY1Q03154 408 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 ABHD18Q0P651 414 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 ABRQ12979 859 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 PRKAA1Q13131 559 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 THOC5Q13769 683 aaKnown RBP9.39□□□□□ -0.91
RNF4-221ENST00000513643 KCNAB1Q14722 419 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 KIR2DS3Q14952 304 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 SLC5A12Q1EHB4 618 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 CCSMST1Q4G0I0 132 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 SYTL3Q4VX76 610 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 SOWAHCQ53LP3 525 aaPredicted RBP9.39□□□□□ -0.91
RNF4-221ENST00000513643 HSP90AA5PQ58FG0 334 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 ACSBG2Q5FVE4 666 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 BROXQ5VW32 411 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 PWWP2BQ6NUJ5 590 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 TRMT10BQ6PF06 316 aaKnown RBP9.39□□□□□ -0.91
RNF4-221ENST00000513643 FBXO38Q6PIJ6 1188 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 CNSTQ6PJW8 725 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 CYS1Q717R9 158 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 MAATS1Q7Z4T9 603 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 KCNMB4Q86W47 210 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 PPP1R3BQ86XI6 285 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 DCUN1D3Q8IWE4 304 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 NLGN4XQ8N0W4 816 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 PDIK1LQ8N165 341 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 FBXO15Q8NCQ5 510 aaPredicted RBP9.39□□□□□ -0.91
RNF4-221ENST00000513643 NLGN4YQ8NFZ3 816 aaPredicted RBP9.39□□□□□ -0.91
RNF4-221ENST00000513643 OR2L8Q8NGY9 312 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 OR8K5Q8NH50 307 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 ASB11Q8WXH4 323 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 SEC14L1Q92503 715 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 LRFN5Q96NI6 719 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 FAM167BQ9BTA0 163 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 AARSD1Q9BTE6 412 aaKnown RBP9.39□□□□□ -0.91
RNF4-221ENST00000513643 SLC12A9Q9BXP2 914 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 SYTL2Q9HCH5 934 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 FAM60AQ9NP50 221 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 FBXO6Q9NRD1 293 aaPredicted RBP9.39□□□□□ -0.91
RNF4-221ENST00000513643 FGF21Q9NSA1 209 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 WHRNQ9P202 907 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 SNX24Q9Y343 169 aa9.39□□□□□ -0.91
RNF4-221ENST00000513643 LOC101059948A0A1B0GTJ6 334 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 A0A1W2PPV9 198 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 MYO1CO00159 1063 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 EIF3FO00303 357 aaPredicted RBP9.38□□□□□ -0.91
RNF4-221ENST00000513643 RECKO95980 971 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 RPN2P04844 631 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 ERVK-10P10266 1014 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 CHRM3P20309 590 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 CCNFP41002 786 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 STAT5AP42229 794 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 GCGRP47871 477 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 CSE1LP55060 971 aaKnown RBP9.38□□□□□ -0.91
RNF4-221ENST00000513643 ARL4CP56559 192 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 CXADRP78310 365 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 MRPS25P82663 173 aaKnown RBP9.38□□□□□ -0.91
RNF4-221ENST00000513643 MPP1Q00013 466 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 FOXM1Q08050 763 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 TUBB3Q13509 450 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 TMED2Q15363 201 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 HIF1AQ16665 826 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 CYP2A13Q16696 494 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 BBS9Q3SYG4 887 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 CRTC2Q53ET0 693 aaPredicted RBP9.38□□□□□ -0.91
RNF4-221ENST00000513643 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.38□□□□□ -0.91
RNF4-221ENST00000513643 ARMC6Q6NXE6 501 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 CYB5D1Q6P9G0 228 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 CCDC81Q6ZN84 652 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 CDHR3Q6ZTQ4 885 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 SPNS2Q8IVW8 549 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 CACNA2D3Q8IZS8 1091 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 DNAJC22Q8N4W6 341 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 ZBTB2Q8N680 514 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 ESX1Q8N693 406 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 SIDT2Q8NBJ9 832 aaKnown RBP9.38□□□□□ -0.91
RNF4-221ENST00000513643 SLC38A9Q8NBW4 561 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 CD200R1Q8TD46 325 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 RAD51AP1Q96B01 352 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 CERS2Q96G23 380 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 SLC45A3Q96JT2 553 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 PHACTR1Q9C0D0 580 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 PDE7BQ9NP56 450 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 IARS2Q9NSE4 1012 aaKnown RBP9.38□□□□□ -0.91
RNF4-221ENST00000513643 CDC23Q9UJX2 597 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 RARRES3Q9UL19 164 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 PLAGL1Q9UM63 463 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 PCDHB3Q9Y5E6 796 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 PCDHGA4Q9Y5G9 962 aa9.38□□□□□ -0.91
RNF4-221ENST00000513643 HELZ2Q9BYK8 2649 aaKnown RBP9.37□□□□□ -0.91
RNF4-221ENST00000513643 COL6A6A6NMZ7 2263 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 GSAPA4D1B5 854 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 ARHGEF33A8MVX0 844 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms