RNA–Protein interactions for RNA: ENST00000512069.6

PDE4D-220, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-220ENST00000512069 DDX60Q8IY21 1712 aaKnown RBP4.24□□□□□ -1.73
PDE4D-220ENST00000512069 VCANP13611 3396 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 CDRT15L2A8MXV6 281 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 SMIM1B2RUZ4 78 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 ZBTB43O43298 467 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 BMP10O95393 424 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 CAVIN2O95810 425 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 GABRB1P18505 474 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 PAX3P23760 479 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 CAMPP49913 170 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 CD81P60033 236 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 IKQ13123 557 aaPredicted RBP4.23□□□□□ -1.73
PDE4D-220ENST00000512069 AIMP2Q13155 320 aaKnown RBP4.23□□□□□ -1.73
PDE4D-220ENST00000512069 SLC39A6Q13433 755 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 TNIP1Q15025 636 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 MEP1AQ16819 746 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 LRIT3Q3SXY7 679 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 ZDHHC20Q5W0Z9 365 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 ARHGAP17Q68EM7 881 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 KIAA0930Q6ICG6 404 aaPredicted RBP4.23□□□□□ -1.73
PDE4D-220ENST00000512069 MAATS1Q7Z4T9 603 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 TBC1D1Q86TI0 1168 aaPredicted RBP4.23□□□□□ -1.73
PDE4D-220ENST00000512069 MCEMP1Q8IX19 187 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 TEX11Q8IYF3 940 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 STPG4Q8N801 248 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 SMPDL3BQ92485 455 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 TM9SF4Q92544 642 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 LGALS12Q96DT0 336 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 TRIM44Q96DX7 344 aaPredicted RBP4.23□□□□□ -1.73
PDE4D-220ENST00000512069 ZNF354BQ96LW1 612 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 SLC22A12Q96S37 553 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 GAD1Q99259 594 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 SEPT11Q9NVA2 429 aaKnown RBP4.23□□□□□ -1.73
PDE4D-220ENST00000512069 OGFRQ9NZT2 677 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 FBXL17Q9UF56 701 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 ACAD8Q9UKU7 415 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 EXO1Q9UQ84 846 aaKnown RBP4.23□□□□□ -1.73
PDE4D-220ENST00000512069 B3GALT5Q9Y2C3 310 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 SCN9AQ15858 1988 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 RAB3GAP2Q9H2M9 1393 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 NCOR1O75376 2440 aa4.23□□□□□ -1.73
PDE4D-220ENST00000512069 ASTN2O75129 1339 aaPredicted RBP4.22□□□□□ -1.73
PDE4D-220ENST00000512069 RIC1Q4ADV7 1423 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 PIEZO1Q92508 2521 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 TEX13DA0A0J9YY54 714 aaPredicted RBP4.22□□□□□ -1.73
PDE4D-220ENST00000512069 YDJCA8MPS7 323 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 BLOC1S5-TXNDC5H3BN57 136 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 TMEM189-UBE2V1I3L0A0 370 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 NTN3O00634 580 aaPredicted RBP4.22□□□□□ -1.73
PDE4D-220ENST00000512069 EDIL3O43854 480 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 PTP4A3O75365 173 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 BAIAP3O94812 1187 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 CGAP01215 116 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 GH2P01242 217 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 LIPFP07098 398 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 MSH3P20585 1137 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 RXRGP48443 463 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 CDH8P55286 799 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 HILS1P60008 231 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 MBTD1Q05BQ5 628 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 UBE2V1Q13404 147 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 RALBP1Q15311 655 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 CRY2Q49AN0 593 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 C1orf141Q5JVX7 400 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 CCDC30Q5VVM6 783 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 FAM180BQ6P0A1 224 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 CASC1Q6TDU7 716 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 ANO5Q75V66 913 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 CHST9Q7L1S5 443 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 DGLUCYQ7Z3D6 616 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 PTOV1Q86YD1 416 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 ARID3BQ8IVW6 561 aaPredicted RBP4.22□□□□□ -1.73
PDE4D-220ENST00000512069 ADGRF2Q8IZF7 708 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 WDSUB1Q8N9V3 476 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 CCDC34Q96HJ3 373 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 OXNAD1Q96HP4 312 aaPredicted RBP4.22□□□□□ -1.73
PDE4D-220ENST00000512069 RBM4Q9BWF3 364 aaKnown RBP4.22□□□□□ -1.73
PDE4D-220ENST00000512069 SEMA6AQ9H2E6 1030 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 APOBEC3GQ9HC16 384 aaKnown RBP4.22□□□□□ -1.73
PDE4D-220ENST00000512069 EIF2B3Q9NR50 452 aaKnown RBP4.22□□□□□ -1.73
PDE4D-220ENST00000512069 NUP98P52948 1817 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 PSME4Q14997 1843 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 ABCC12Q96J65 1359 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 SSC5DA1L4H1 1573 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 LAMB2P55268 1798 aa4.22□□□□□ -1.73
PDE4D-220ENST00000512069 SPTBN5Q9NRC6 3674 aaKnown RBP4.22□□□□□ -1.73
PDE4D-220ENST00000512069 HMGB1P1B2RPK0 211 aaPredicted RBP4.21□□□□□ -1.74
PDE4D-220ENST00000512069 TCERG1O14776 1098 aaKnown RBP4.21□□□□□ -1.74
PDE4D-220ENST00000512069 STARD3NLO95772 234 aa4.21□□□□□ -1.74
PDE4D-220ENST00000512069 LDLRP01130 860 aa4.21□□□□□ -1.74
PDE4D-220ENST00000512069 KRT19P08727 400 aa4.21□□□□□ -1.74
PDE4D-220ENST00000512069 ERVK-10P10266 1014 aa4.21□□□□□ -1.74
PDE4D-220ENST00000512069 PON1P27169 355 aa4.21□□□□□ -1.74
PDE4D-220ENST00000512069 NR0B1P51843 470 aaKnown RBP4.21□□□□□ -1.74
PDE4D-220ENST00000512069 ARF3P61204 181 aaPredicted RBP4.21□□□□□ -1.74
PDE4D-220ENST00000512069 MRPS5P82675 430 aaKnown RBP4.21□□□□□ -1.74
PDE4D-220ENST00000512069 ARF1P84077 181 aaKnown RBP4.21□□□□□ -1.74
PDE4D-220ENST00000512069 SP3Q02447 781 aa4.21□□□□□ -1.74
PDE4D-220ENST00000512069 PPIGQ13427 754 aaKnown RBP eCLIP4.21□□□□□ -1.74
PDE4D-220ENST00000512069 NDUFAF5Q5TEU4 345 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 1161.1 ms