RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 EFSO43281 561 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 RAD1O60671 282 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 TIAF1O95411 115 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 C1orf105O95561 183 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 AHSGP02765 367 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 PEBP1P30086 187 aaKnown RBP13.52□□□□□ -0.25
DDX41-212ENST00000511040 RAB28P51157 221 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 PLTPP55058 493 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 TMPRSS3P57727 454 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 KLHL38Q2WGJ6 581 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 MANEAQ5SRI9 462 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 RBM20Q5T481 1227 aaKnown RBP13.52□□□□□ -0.25
DDX41-212ENST00000511040 ARHGAP40Q5TG30 622 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 SPESP1Q6UW49 350 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 TIPARPQ7Z3E1 657 aaKnown RBP13.52□□□□□ -0.25
DDX41-212ENST00000511040 DTX1Q86Y01 620 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 KMT5CQ86Y97 462 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 CNTN4Q8IWV2 1026 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 CPNE9Q8IYJ1 553 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 CACNA2D3Q8IZS8 1091 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 D2HGDHQ8N465 521 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 LINC01555Q8NAE3 123 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 INPP5DQ92835 1189 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 NKD1Q969G9 470 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 FOPNLQ96NB1 174 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 CCNL2Q96S94 520 aaPredicted RBP13.52□□□□□ -0.25
DDX41-212ENST00000511040 LRRC1Q9BTT6 524 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 MENTQ9BUN1 341 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 ULBP3Q9BZM4 244 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 RAB17Q9H0T7 212 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 PRORYQ9H606 182 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 LATS2Q9NRM7 1088 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 C1GALT1Q9NS00 363 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 OR6C2Q9NZP2 312 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 RARRES3Q9UL19 164 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 SLC39A10Q9ULF5 831 aa13.52□□□□□ -0.25
DDX41-212ENST00000511040 ARHGEF33A8MVX0 844 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.51□□□□□ -0.25
DDX41-212ENST00000511040 KDM1AO60341 852 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 VPS26AO75436 327 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 SPAG6O75602 509 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 PIAS1O75925 651 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 KIAA0754O94854 1291 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 MATN4O95460 622 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 FGF5P12034 268 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 WT1P19544 449 aaPredicted RBP13.51□□□□□ -0.25
DDX41-212ENST00000511040 MCM3P25205 808 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 ATP5DP30049 168 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 ATP1A2P50993 1020 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 PGGT1BP53609 377 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 CDKN2DP55273 166 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 TIAL1Q01085 375 aaKnown RBP eCLIP13.51□□□□□ -0.25
DDX41-212ENST00000511040 IL11RAQ14626 422 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 TTLL9Q3SXZ7 439 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 TMTC4Q5T4D3 741 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 C8orf74Q6P047 294 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 TTC23LQ6PF05 361 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 CCDC25Q86WR0 208 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 PPP1R3BQ86XI6 285 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 IL22RA1Q8N6P7 574 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 GPATCH11Q8N954 259 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 GALNT6Q8NCL4 622 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 FLVCR1-AS1Q8TAF5 88 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 GABPB2Q8TAK5 448 aaPredicted RBP13.51□□□□□ -0.25
DDX41-212ENST00000511040 CD200R1Q8TD46 325 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 PYROXD1Q8WU10 500 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 KCNJ9Q92806 393 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 TRAPPC9Q96Q05 1148 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 ZPBPQ9BS86 351 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 PITPNM3Q9BZ71 974 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 SPRY4Q9C004 299 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 PDE7BQ9NP56 450 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 FGF21Q9NSA1 209 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 LNPEPQ9UIQ6 1025 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 PILRAQ9UKJ1 303 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 BTRCQ9Y297 605 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 KLHL20Q9Y2M5 609 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 DHRS7Q9Y394 339 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 MRFAP1Q9Y605 127 aa13.51□□□□□ -0.25
DDX41-212ENST00000511040 RASGRF2O14827 1237 aa13.5□□□□□ -0.25
DDX41-212ENST00000511040 CD9P21926 228 aa13.5□□□□□ -0.25
DDX41-212ENST00000511040 SSTR1P30872 391 aa13.5□□□□□ -0.25
DDX41-212ENST00000511040 UCNP55089 124 aa13.5□□□□□ -0.25
DDX41-212ENST00000511040 TUBB4BP68371 445 aa13.5□□□□□ -0.25
DDX41-212ENST00000511040 ACY1Q03154 408 aa13.5□□□□□ -0.25
DDX41-212ENST00000511040 MGAT5Q09328 741 aa13.5□□□□□ -0.25
DDX41-212ENST00000511040 TUBB2AQ13885 445 aa13.5□□□□□ -0.25
DDX41-212ENST00000511040 COL9A2Q14055 689 aaPredicted RBP13.5□□□□□ -0.25
DDX41-212ENST00000511040 ZIC1Q15915 447 aa13.5□□□□□ -0.25
DDX41-212ENST00000511040 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.5□□□□□ -0.25
DDX41-212ENST00000511040 PRAMEF17Q5VTA0 474 aa13.5□□□□□ -0.25
DDX41-212ENST00000511040 PWWP2BQ6NUJ5 590 aa13.5□□□□□ -0.25
DDX41-212ENST00000511040 ZDHHC24Q6UX98 284 aa13.5□□□□□ -0.25
DDX41-212ENST00000511040 CCDC81Q6ZN84 652 aa13.5□□□□□ -0.25
DDX41-212ENST00000511040 KIAA0408Q6ZU52 694 aa13.5□□□□□ -0.25
DDX41-212ENST00000511040 PIWIL4Q7Z3Z4 852 aaKnown RBP13.5□□□□□ -0.25
DDX41-212ENST00000511040 NLGN4XQ8N0W4 816 aa13.5□□□□□ -0.25
DDX41-212ENST00000511040 CARFQ8N187 725 aa13.5□□□□□ -0.25
DDX41-212ENST00000511040 NOA1Q8NC60 698 aaKnown RBP13.5□□□□□ -0.25
DDX41-212ENST00000511040 NLGN4YQ8NFZ3 816 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms