RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 COLEC12Q5KU26 742 aa14.31□□□□□ -0.12
UBE2D3-228ENST00000508974 CTSL3PQ5NE16 218 aa14.31□□□□□ -0.12
UBE2D3-228ENST00000508974 OR8K5Q8NH50 307 aa14.31□□□□□ -0.12
UBE2D3-228ENST00000508974 GSDMBQ8TAX9 411 aa14.31□□□□□ -0.12
UBE2D3-228ENST00000508974 OSBPL9Q96SU4 736 aa14.31□□□□□ -0.12
UBE2D3-228ENST00000508974 CHST8Q9H2A9 424 aa14.31□□□□□ -0.12
UBE2D3-228ENST00000508974 ADNPQ9H2P0 1102 aa14.31□□□□□ -0.12
UBE2D3-228ENST00000508974 ACTR5Q9H9F9 607 aaPredicted RBP14.31□□□□□ -0.12
UBE2D3-228ENST00000508974 IRAK4Q9NWZ3 460 aa14.31□□□□□ -0.12
UBE2D3-228ENST00000508974 SAMD15Q9P1V8 674 aa14.31□□□□□ -0.12
UBE2D3-228ENST00000508974 CRYL1Q9Y2S2 319 aa14.31□□□□□ -0.12
UBE2D3-228ENST00000508974 NFS1Q9Y697 457 aa14.31□□□□□ -0.12
UBE2D3-228ENST00000508974 A0A0J9YY10 115 aa14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 C21orf140B9A014 251 aa14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 KDM1AO60341 852 aa14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 NIPSNAP2O75323 286 aa14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 GPC4O75487 556 aa14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 KLK3P07288 261 aaPredicted RBP14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 CTSBP07858 339 aa14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 NR1D1P20393 614 aa14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 PKLRP30613 574 aa14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 ITGA1P56199 1179 aa14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 RPS15P62841 145 aaKnown RBP14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 ZNF789Q5FWF6 425 aa14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 MRNIPQ6NTE8 343 aa14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 CNSTQ6PJW8 725 aa14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 OTOAQ7RTW8 1153 aa14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 SDCCAG8Q86SQ7 713 aaPredicted RBP14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 CAND1Q86VP6 1230 aaKnown RBP14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 FLVCR1-AS1Q8TAF5 88 aa14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 C9orf43Q8TAL5 461 aaPredicted RBP14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 ZNF669Q96BR6 464 aaPredicted RBP14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 PANX3Q96QZ0 392 aa14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 MRM3Q9HC36 420 aaKnown RBP14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 LATS2Q9NRM7 1088 aa14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 OR6C2Q9NZP2 312 aa14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 SERTAD3Q9UJW9 196 aa14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 POLHQ9Y253 713 aa14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 MAN2B2Q9Y2E5 1009 aa14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 PCDHGA6Q9Y5G7 932 aa14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 KCNMB2Q9Y691 235 aa14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 TNRC6AQ8NDV7 1962 aaKnown RBP14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 FER1L5A0AVI2 2057 aa14.3□□□□□ -0.12
UBE2D3-228ENST00000508974 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 E7EQ34 232 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 MEN1O00255 615 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 ZSCAN12O43309 604 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 ZNF749O43361 778 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 KIF5CO60282 957 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 PHF2O75151 1096 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 DNAJB5O75953 348 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 RPN2P04844 631 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 PTPN4P29074 926 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 RAB28P51157 221 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 CHAF1BQ13112 559 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 IL10RAQ13651 578 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 DHX34Q14147 1143 aaKnown RBP14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 GRB7Q14451 532 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 CCSMST1Q4G0I0 132 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 PLEKHS1Q5SXH7 462 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 C1orf189Q5VU69 101 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 KIAA0930Q6ICG6 404 aaPredicted RBP14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 UNC5DQ6UXZ4 953 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 SPNS2Q8IVW8 549 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 DCUN1D3Q8IWE4 304 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 SYTL1Q8IYJ3 562 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 GPR135Q8IZ08 494 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 DSELQ8IZU8 1212 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 ENDOVQ8N8Q3 282 aaKnown RBP14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 LINC01555Q8NAE3 123 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 LPGAT1Q92604 370 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 ABHD17AQ96GS6 310 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 NAP1L3Q99457 506 aaPredicted RBP14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 SPRTNQ9H040 489 aaPredicted RBP14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 PCMTD2Q9NV79 361 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 SLC39A10Q9ULF5 831 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 FARSAQ9Y285 508 aaKnown RBP14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 CCDC88CQ9P219 2028 aa14.29□□□□□ -0.12
UBE2D3-228ENST00000508974 USP27XA6NNY8 438 aa14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 OR2B3O76000 313 aa14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 SLCO2B1O94956 709 aa14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 PAMP19021 973 aa14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 MAGP20916 626 aa14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 CD9P21926 228 aa14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 RPS3P23396 243 aaKnown RBP eCLIP14.28□□□□□ -0.125e-12■□□□□ 9.4
UBE2D3-228ENST00000508974 RORAP35398 523 aa14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 MAGEA6P43360 314 aa14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 SLC9A5Q14940 896 aa14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 KIR2DS3Q14952 304 aa14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 CYP1B1Q16678 543 aa14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 KYNUQ16719 465 aa14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 CRTC2Q53ET0 693 aaPredicted RBP14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 ZNF470Q6ECI4 717 aa14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 LRRC6Q86X45 466 aa14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 TCTN2Q96GX1 697 aa14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 BIRC8Q96P09 236 aa14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 SERPINB12Q96P63 405 aa14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 MENTQ9BUN1 341 aa14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 GPR87Q9BY21 358 aa14.28□□□□□ -0.12
UBE2D3-228ENST00000508974 SYTL2Q9HCH5 934 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms