RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 AGTRAPQ6RW13 159 aa16.98■□□□□ 0.31
RNF4-209ENST00000507784 RABEPKQ7Z6M1 372 aa16.98■□□□□ 0.31
RNF4-209ENST00000507784 RAB42Q8N4Z0 105 aa16.98■□□□□ 0.31
RNF4-209ENST00000507784 TEX9Q8N6V9 391 aa16.98■□□□□ 0.31
RNF4-209ENST00000507784 SNX31Q8N9S9 440 aa16.98■□□□□ 0.31
RNF4-209ENST00000507784 MED8Q96G25 268 aa16.98■□□□□ 0.31
RNF4-209ENST00000507784 IL17FQ96PD4 163 aa16.98■□□□□ 0.31
RNF4-209ENST00000507784 DRC3Q9H069 523 aa16.98■□□□□ 0.31
RNF4-209ENST00000507784 ERVMER34-1Q9H9K5 563 aa16.98■□□□□ 0.31
RNF4-209ENST00000507784 SLCO1B3Q9NPD5 702 aa16.98■□□□□ 0.31
RNF4-209ENST00000507784 SEMA4BQ9NPR2 832 aaPredicted RBP16.98■□□□□ 0.31
RNF4-209ENST00000507784 STOX2Q9P2F5 926 aaPredicted RBP16.98■□□□□ 0.31
RNF4-209ENST00000507784 OPTCQ9UBM4 332 aa16.98■□□□□ 0.31
RNF4-209ENST00000507784 LNPEPQ9UIQ6 1025 aa16.98■□□□□ 0.31
RNF4-209ENST00000507784 PCOLCE2Q9UKZ9 415 aa16.98■□□□□ 0.31
RNF4-209ENST00000507784 ADAMTS9Q9P2N4 1935 aa16.98■□□□□ 0.31
RNF4-209ENST00000507784 SDK1Q7Z5N4 2213 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 PRAMEF33A0A0G2JMD5 474 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 MYO1CO00159 1063 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 YY2O15391 372 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 SHOX2O60902 331 aaPredicted RBP16.97■□□□□ 0.31
RNF4-209ENST00000507784 PIAS2O75928 621 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 WDR47O94967 919 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 VIPP01282 170 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 RPS17P08708 135 aaKnown RBP16.97■□□□□ 0.31
RNF4-209ENST00000507784 ARL1P40616 181 aaPredicted RBP16.97■□□□□ 0.31
RNF4-209ENST00000507784 ARRB1P49407 418 aaPredicted RBP16.97■□□□□ 0.31
RNF4-209ENST00000507784 CLCQ05315 142 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 BNIP3Q12983 259 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 NAE1Q13564 534 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 GTF2H2Q13888 395 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 PCBP2Q15366 365 aaKnown RBP eCLIP16.97■□□□□ 0.31
RNF4-209ENST00000507784 GTF2H2CQ6P1K8 395 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 IYDQ6PHW0 289 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 ZC3H14Q6PJT7 736 aaKnown RBP16.97■□□□□ 0.31
RNF4-209ENST00000507784 CPLX4Q7Z7G2 160 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 CRLF3Q8IUI8 442 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 SYTL1Q8IYJ3 562 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 C2orf73Q8N5S3 287 aaPredicted RBP16.97■□□□□ 0.31
RNF4-209ENST00000507784 LMNTD1Q8N9Z9 388 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 PPFIBP2Q8ND30 876 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 ZNF548Q8NEK5 533 aaPredicted RBP16.97■□□□□ 0.31
RNF4-209ENST00000507784 OR6Y1Q8NGX8 325 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 TRPC4APQ8TEL6 797 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 ZNF483Q8TF39 744 aaPredicted RBP16.97■□□□□ 0.31
RNF4-209ENST00000507784 UBTD2Q8WUN7 234 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 ATP6V1E2Q96A05 226 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 PYCR2Q96C36 320 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 NSUN5Q96P11 429 aaKnown RBP16.97■□□□□ 0.31
RNF4-209ENST00000507784 ELF4Q99607 663 aaPredicted RBP16.97■□□□□ 0.31
RNF4-209ENST00000507784 NSRP1Q9H0G5 558 aaKnown RBP16.97■□□□□ 0.31
RNF4-209ENST00000507784 EPN3Q9H201 632 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 GSTO2Q9H4Y5 243 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 EML4Q9HC35 981 aaKnown RBP16.97■□□□□ 0.31
RNF4-209ENST00000507784 FGFR1OP2Q9NVK5 253 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 ZNF624Q9P2J8 865 aaPredicted RBP16.97■□□□□ 0.31
RNF4-209ENST00000507784 SLC6A14Q9UN76 642 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 ASB1Q9Y576 335 aa16.97■□□□□ 0.31
RNF4-209ENST00000507784 A6NCN8 305 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 OR5K4A6NMS3 321 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 PATE3B3GLJ2 98 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 KDM1AO60341 852 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 EDF1O60869 148 aaKnown RBP16.96■□□□□ 0.31
RNF4-209ENST00000507784 SNNO75324 88 aaPredicted RBP16.96■□□□□ 0.31
RNF4-209ENST00000507784 SLC16A8O95907 504 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 CHRNGP07510 517 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 KITP10721 976 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 NDUFS1P28331 727 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 IMPA1P29218 277 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 SERPINB5P36952 375 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 SLC19A1P41440 591 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 PNLIPRP1P54315 467 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 NAA20P61599 178 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 SF3A3Q12874 501 aaKnown RBP eCLIP16.96■□□□□ 0.31
RNF4-209ENST00000507784 GRB7Q14451 532 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 DEFB133Q30KQ1 61 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 PTCHD3Q3KNS1 767 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 TRIM61Q5EBN2 209 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 ARL13AQ5H913 290 aaPredicted RBP16.96■□□□□ 0.31
RNF4-209ENST00000507784 PEAR1Q5VY43 1037 aaPredicted RBP16.96■□□□□ 0.31
RNF4-209ENST00000507784 FRMD7Q6ZUT3 714 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 GOLGA7Q7Z5G4 137 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 AGR3Q8TD06 166 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 ZNF480Q8WV37 535 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 PATE1Q8WXA2 126 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 ZNF317Q96PQ6 595 aaPredicted RBP16.96■□□□□ 0.31
RNF4-209ENST00000507784 C20orf27Q9GZN8 174 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 ARRDC1-AS1Q9H2J1 176 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 SLC32A1Q9H598 525 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 XKR8Q9H6D3 395 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 UCKL1Q9NWZ5 548 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 PCTPQ9UKL6 214 aa16.96■□□□□ 0.31
RNF4-209ENST00000507784 KIR2DS5A0A0G2JLQ3 304 aa16.95■□□□□ 0.3
RNF4-209ENST00000507784 A0A0G2JNG1 304 aa16.95■□□□□ 0.3
RNF4-209ENST00000507784 ZNF839A8K0R7 811 aa16.95■□□□□ 0.3
RNF4-209ENST00000507784 K7EPI3 171 aa16.95■□□□□ 0.3
RNF4-209ENST00000507784 KIR2DS3K7RE56 304 aa16.95■□□□□ 0.3
RNF4-209ENST00000507784 EPN2O95208 641 aa16.95■□□□□ 0.3
RNF4-209ENST00000507784 HOXD12P35452 270 aa16.95■□□□□ 0.3
RNF4-209ENST00000507784 GGT5P36269 586 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms