RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 KIAA1191Q96A73 305 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 ALKBH8Q96BT7 664 aaKnown RBP8.22□□□□□ -1.09
PDGFC-205ENST00000506880 ELMO2Q96JJ3 720 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 MAGEB10Q96LZ2 347 aaPredicted RBP8.22□□□□□ -1.09
PDGFC-205ENST00000506880 PWWP2AQ96N64 755 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 TSNARE1Q96NA8 513 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 CAMK1GQ96NX5 476 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 FERD3LQ96RJ6 166 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 MIPEPQ99797 713 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 HAUS8Q9BT25 410 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 PARD6BQ9BYG5 372 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 PITPNM3Q9BZ71 974 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 ZNF768Q9H5H4 540 aaKnown RBP8.22□□□□□ -1.09
PDGFC-205ENST00000506880 MKS1Q9NXB0 559 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 SIRPGQ9P1W8 387 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 MID2Q9UJV3 735 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 ACSL6Q9UKU0 697 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 POMT2Q9UKY4 750 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 SLC39A10Q9ULF5 831 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 BTRCQ9Y297 605 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 WDR37Q9Y2I8 494 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 MSRB2Q9Y3D2 182 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 PRKAB1Q9Y478 270 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 PCDHB11Q9Y5F2 797 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 PSAT1Q9Y617 370 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 SNRNP200O75643 2136 aaKnown RBP8.21□□□□□ -1.09
PDGFC-205ENST00000506880 CCDC187A0A096LP49 1063 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 OR52A4PA6NMU1 304 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 TXNDC9O14530 226 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 B4GAT1O43505 415 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 ZBTB11O95625 1053 aaPredicted RBP8.21□□□□□ -1.1
PDGFC-205ENST00000506880 TSPAN12O95859 305 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 MT-CO3P00414 261 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 RPLP0P05388 317 aaKnown RBP8.21□□□□□ -1.1
PDGFC-205ENST00000506880 LTA4HP09960 611 aaKnown RBP8.21□□□□□ -1.1
PDGFC-205ENST00000506880 THRAP10827 490 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 JUPP14923 745 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 TYK2P29597 1187 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 PDHA2P29803 388 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 HPDP32754 393 aaPredicted RBP8.21□□□□□ -1.1
PDGFC-205ENST00000506880 GGT5P36269 586 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 LSSP48449 732 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 PIK3CGP48736 1102 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 EMP3P54852 163 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 INHBCP55103 352 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 CDKN2DP55273 166 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 MAZP56270 477 aaKnown RBP8.21□□□□□ -1.1
PDGFC-205ENST00000506880 TAS2R39P59534 338 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 ERVPABLB-1P60509 514 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 TIAL1Q01085 375 aaKnown RBP eCLIP8.21□□□□□ -1.1
PDGFC-205ENST00000506880 INSM1Q01101 510 aaPredicted RBP8.21□□□□□ -1.1
PDGFC-205ENST00000506880 ACY1Q03154 408 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 ISXQ2M1V0 245 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 ERCC6LQ2NKX8 1250 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 ACSBG2Q5FVE4 666 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 ZNF789Q5FWF6 425 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 TMTC4Q5T4D3 741 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 TMEM164Q5U3C3 297 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 YOD1Q5VVQ6 348 aaPredicted RBP8.21□□□□□ -1.1
PDGFC-205ENST00000506880 NIPAL1Q6NVV3 410 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 PAQR3Q6TCH7 311 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 LRIG3Q6UXM1 1119 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 ARHGAP22Q7Z5H3 698 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 UNC5BQ8IZJ1 945 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 KRT222Q8N1A0 295 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 OR52E1Q8NGJ3 308 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 WDR36Q8NI36 951 aaKnown RBP8.21□□□□□ -1.1
PDGFC-205ENST00000506880 KLHL6Q8WZ60 621 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 FBXL8Q96CD0 374 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 NXPE2Q96DL1 559 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 CCDC126Q96EE4 140 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 THAP11Q96EK4 314 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 CCDC97Q96F63 343 aaPredicted RBP8.21□□□□□ -1.1
PDGFC-205ENST00000506880 TRIM56Q9BRZ2 755 aaKnown RBP8.21□□□□□ -1.1
PDGFC-205ENST00000506880 DDA1Q9BW61 102 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 ASPSCR1Q9BZE9 553 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 FBXO8Q9NRD0 319 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 SMYD2Q9NRG4 433 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 GPRC5BQ9NZH0 403 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 SCHIP1Q9P0W5 487 aaPredicted RBP8.21□□□□□ -1.1
PDGFC-205ENST00000506880 DCDC2Q9UHG0 476 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 LGALS13Q9UHV8 139 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 PLEKHM1Q9Y4G2 1056 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 OARD1Q9Y530 152 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 PCDHGA7Q9Y5G6 932 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 PCDHGA3Q9Y5H0 932 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 TNPO3Q9Y5L0 923 aaKnown RBP8.21□□□□□ -1.1
PDGFC-205ENST00000506880 ACTL7BQ9Y614 415 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 CEP295Q9C0D2 2601 aa8.21□□□□□ -1.1
PDGFC-205ENST00000506880 TPRP12270 2363 aaKnown RBP8.21□□□□□ -1.1
PDGFC-205ENST00000506880 A0A1W2PQM1 296 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 PIPSLA2A3N6 862 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 IQCF5A8MTL0 148 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 CXorf49A8MYA2 514 aaPredicted RBP8.2□□□□□ -1.1
PDGFC-205ENST00000506880 KERAO60938 352 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 SNUPNO95149 360 aaKnown RBP8.2□□□□□ -1.1
PDGFC-205ENST00000506880 KLHL2O95198 593 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 EML2O95834 649 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 ANXA5P08758 320 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 CD63P08962 238 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms