RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 KATNA1O75449 491 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 VAPBO95292 243 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 KRT14P02533 472 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 APOA4P06727 396 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 RAB40ALP0C0E4 278 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 MLNP12872 115 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 OGNP20774 298 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 COILP38432 576 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 MAGEA3P43357 314 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 RAB28P51157 221 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 CSE1LP55060 971 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 ADARP55265 1226 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 ITGA1P56199 1179 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 RPS18P62269 152 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 GPS1Q13098 491 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 ERV3-1Q14264 604 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 GBX1Q14549 363 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 KIR2DS3Q14952 304 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 UGT8Q16880 541 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 CTSL3PQ5NE16 218 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 LCN10Q6JVE6 187 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 FAM198BQ6UWH4 519 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 SYVN1Q86TM6 617 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 TMEM135Q86UB9 458 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 APLFQ8IW19 511 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 DCUN1D3Q8IWE4 304 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 LINC01555Q8NAE3 123 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 MCUQ8NE86 351 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 COG1Q8WTW3 980 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 SEC14L1Q92503 715 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 LPGAT1Q92604 370 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 MAGOHBQ96A72 148 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 TCTN2Q96GX1 697 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 PANX3Q96QZ0 392 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 TCF12Q99081 682 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 KLHL25Q9H0H3 589 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 CHST8Q9H2A9 424 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 KCNF1Q9H3M0 494 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 GRPEL1Q9HAV7 217 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 GNPTGQ9UJJ9 305 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 SERTAD3Q9UJW9 196 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 PLAGL1Q9UM63 463 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 FARSAQ9Y285 508 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 TDRKHQ9Y2W6 561 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 HEMK1Q9Y5R4 338 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 BOD1L1Q8NFC6 3051 aa8.76□□□□□ -1.01
PDLIM5-209ENST00000506632 FAM237BA0A1B0GVD1 139 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 CDC14CA4D256 554 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 GOLGA8KD6RF30 607 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 GOLGA8TH3BQL2 631 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 PGRMC1O00264 195 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 CES2O00748 559 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 KPNA5O15131 536 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 PRICKLE3O43900 615 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 KDM1AO60341 852 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 NDUFS3O75489 264 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 RPN2P04844 631 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 KLK3P07288 261 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 CYP2A7P20853 494 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 CD9P21926 228 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 GCGRP47871 477 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 FNTAP49354 379 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 VPS41P49754 854 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 PMS2P54278 862 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 EIF3BP55884 814 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 SARNPP82979 210 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 IL10RAQ13651 578 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 TMED2Q15363 201 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 RNF187Q5TA31 235 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 PTRHD1Q6GMV3 140 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 MRNIPQ6NTE8 343 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 CCDC137Q6PK04 289 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 CENPUQ71F23 418 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 PRICKLE2Q7Z3G6 844 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 CILP2Q8IUL8 1156 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 SYTL1Q8IYJ3 562 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 SLC35F6Q8N357 371 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 DNAJC22Q8N4W6 341 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 OR2L8Q8NGY9 312 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 C9orf43Q8TAL5 461 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 ACTRT1Q8TDG2 376 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 ADAMTS17Q8TE56 1095 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 MR1Q95460 341 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 ABHD17AQ96GS6 310 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 SERPINB12Q96P63 405 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 OSBPL9Q96SU4 736 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 NAP1L3Q99457 506 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 TRIM56Q9BRZ2 755 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 NLNQ9BYT8 704 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 ACTR5Q9H9F9 607 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 MED13Q9UHV7 2174 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 NBASA2RRP1 2371 aa8.75□□□□□ -1.01
PDLIM5-209ENST00000506632 ZCWPW2A0A1B0GU75 182 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 MAGEB16A2A368 324 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 ISM1B1AKI9 464 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 E7EQ34 232 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 H3BMM5 538 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 RASGRF2O14827 1237 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 ZNF749O43361 778 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 PHF2O75151 1096 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms