RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 NUP85Q9BW27 656 aa3.47□□□□□ -1.85
CHD1-203ENST00000505657 BARHL1Q9BZE3 327 aa3.47□□□□□ -1.85
CHD1-203ENST00000505657 WNT5BQ9H1J7 359 aa3.47□□□□□ -1.85
CHD1-203ENST00000505657 MYNNQ9NPC7 610 aa3.47□□□□□ -1.85
CHD1-203ENST00000505657 INTS10Q9NVR2 710 aaKnown RBP3.47□□□□□ -1.85
CHD1-203ENST00000505657 C2orf42Q9NWW7 574 aa3.47□□□□□ -1.85
CHD1-203ENST00000505657 CACNG4Q9UBN1 327 aa3.47□□□□□ -1.85
CHD1-203ENST00000505657 PADI2Q9Y2J8 665 aa3.47□□□□□ -1.85
CHD1-203ENST00000505657 MRPS28Q9Y2Q9 187 aaKnown RBP3.47□□□□□ -1.85
CHD1-203ENST00000505657 NME7Q9Y5B8 376 aa3.47□□□□□ -1.85
CHD1-203ENST00000505657 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 TRIM77I1YAP6 450 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 RNASEH1O60930 286 aaKnown RBP3.46□□□□□ -1.86
CHD1-203ENST00000505657 ZNF821O75541 412 aaPredicted RBP3.46□□□□□ -1.86
CHD1-203ENST00000505657 PRKRAO75569 313 aaKnown RBP3.46□□□□□ -1.86
CHD1-203ENST00000505657 GPIP06744 558 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 LINGO3P0C6S8 592 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 PLA2G4BP0C869 781 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 PFKFB1P16118 471 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 ZNF26P17031 533 aaPredicted RBP3.46□□□□□ -1.86
CHD1-203ENST00000505657 CYP11B2P19099 503 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 JAK1P23458 1154 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 SLC6A6P31641 620 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 MC5RP33032 325 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 SLC9A3P48764 834 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 CCR3P51677 355 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 MAT1AQ00266 395 aaKnown RBP3.46□□□□□ -1.86
CHD1-203ENST00000505657 SQLEQ14534 574 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 CA9Q16790 459 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 LETM2Q2VYF4 491 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 SLC25A53Q5H9E4 307 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 ERMARDQ5T6L9 678 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 GPR139Q6DWJ6 353 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 BHLHB9Q6PI77 547 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 PRPF39Q86UA1 669 aaKnown RBP3.46□□□□□ -1.86
CHD1-203ENST00000505657 POGLUT1Q8NBL1 392 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 ADAD2Q8NCV1 583 aaKnown RBP3.46□□□□□ -1.86
CHD1-203ENST00000505657 PPFIBP2Q8ND30 876 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 SSMEM1Q8WWF3 244 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 HPSE2Q8WWQ2 592 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 SECISBP2LQ93073 1101 aaKnown RBP3.46□□□□□ -1.86
CHD1-203ENST00000505657 DHX58Q96C10 678 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 GIMAP5Q96F15 307 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 ANKZF1Q9H8Y5 726 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 CNOT10Q9H9A5 744 aaKnown RBP3.46□□□□□ -1.86
CHD1-203ENST00000505657 DPP3Q9NY33 737 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 TAB2Q9NYJ8 693 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 MORF4L1Q9UBU8 362 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 CACNG5Q9UF02 275 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 RNF150Q9ULK6 438 aa3.46□□□□□ -1.86
CHD1-203ENST00000505657 P4HA2O15460 535 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 TADA2AO75478 443 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 SLCO2B1O94956 709 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 EML2O95834 649 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 FAM157CP0CG43 387 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 HAPLN1P10915 354 aaPredicted RBP3.45□□□□□ -1.86
CHD1-203ENST00000505657 LMAN1P49257 510 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 PPP5CP53041 499 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 MAPK12P53778 367 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 UBXN2AP68543 259 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 PRKCZQ05513 592 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 TAF10Q12962 218 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 HSPB3Q12988 150 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 ALCAMQ13740 583 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 SNTB1Q13884 538 aaKnown RBP3.45□□□□□ -1.86
CHD1-203ENST00000505657 TMEM187Q14656 261 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 RRS1Q15050 365 aaKnown RBP3.45□□□□□ -1.86
CHD1-203ENST00000505657 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 NUP54Q7Z3B4 507 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 ARHGAP22Q7Z5H3 698 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 RTN4RL2Q86UN3 420 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 KCTD6Q8NC69 237 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 DDHD1Q8NEL9 900 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 SYN2Q92777 582 aaPredicted RBP3.45□□□□□ -1.86
CHD1-203ENST00000505657 SLAMF9Q96A28 289 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 SFXN2Q96NB2 322 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 PIGQQ9BRB3 760 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 GFRA4Q9GZZ7 299 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 SHARPINQ9H0F6 387 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 TMX4Q9H1E5 349 aaPredicted RBP3.45□□□□□ -1.86
CHD1-203ENST00000505657 FLRT3Q9NZU0 649 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 ABT1Q9ULW3 272 aaKnown RBP3.45□□□□□ -1.86
CHD1-203ENST00000505657 TMED3Q9Y3Q3 217 aa3.45□□□□□ -1.86
CHD1-203ENST00000505657 A0A1W2PPQ1 181 aa3.44□□□□□ -1.86
CHD1-203ENST00000505657 TRBC2A0A5B9 178 aa3.44□□□□□ -1.86
CHD1-203ENST00000505657 ANKRD61A6NGH8 418 aa3.44□□□□□ -1.86
CHD1-203ENST00000505657 CDC123O75794 336 aaPredicted RBP3.44□□□□□ -1.86
CHD1-203ENST00000505657 DDHD2O94830 711 aa3.44□□□□□ -1.86
CHD1-203ENST00000505657 CGAP01215 116 aa3.44□□□□□ -1.86
CHD1-203ENST00000505657 IGLV1-44P01699 117 aa3.44□□□□□ -1.86
CHD1-203ENST00000505657 EDN1P05305 212 aa3.44□□□□□ -1.86
CHD1-203ENST00000505657 HMBSP08397 361 aa3.44□□□□□ -1.86
CHD1-203ENST00000505657 RAB40ALP0C0E4 278 aa3.44□□□□□ -1.86
CHD1-203ENST00000505657 IGHV4-31P0DP07 118 aa3.44□□□□□ -1.86
CHD1-203ENST00000505657 AZGP1P25311 298 aaKnown RBP3.44□□□□□ -1.86
CHD1-203ENST00000505657 CDR2Q01850 454 aa3.44□□□□□ -1.86
CHD1-203ENST00000505657 VWC2Q2TAL6 325 aa3.44□□□□□ -1.86
CHD1-203ENST00000505657 ZFP69Q49AA0 526 aa3.44□□□□□ -1.86
CHD1-203ENST00000505657 ADAMTSL4-AS1Q5T5F5 129 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms