RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 BORAQ6PGQ7 559 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 SLC2A7Q6PXP3 512 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 RBM44Q6ZP01 1051 aaKnown RBP7.25□□□□□ -1.25
PDGFC-203ENST00000502773 SYVN1Q86TM6 617 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 YAF2Q8IY57 180 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 KRT78Q8N1N4 520 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 MFSD2AQ8NA29 543 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 OR2T12Q8NG77 320 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 ZFP28Q8NHY6 868 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 MCCC1Q96RQ3 725 aaPredicted RBP7.25□□□□□ -1.25
PDGFC-203ENST00000502773 UNKQ9C0B0 810 aaKnown RBP7.25□□□□□ -1.25
PDGFC-203ENST00000502773 CRISPLD2Q9H0B8 497 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 SPHK2Q9NRA0 654 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 UCKL1Q9NWZ5 548 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 GALPQ9UBC7 116 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 INVSQ9Y283 1065 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 ATP6AP2A0A1C7CYW4 349 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 H0Y858 1186 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 B4GALT3O60512 393 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 ATP6AP2O75787 350 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 PABPC4LP0CB38 370 aaKnown RBP7.25□□□□□ -1.25
PDGFC-203ENST00000502773 IL1RNP18510 177 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 GGT5P36269 586 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 WDR5P61964 334 aaKnown RBP7.25□□□□□ -1.25
PDGFC-203ENST00000502773 ACSM2AQ08AH3 577 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 EIF2B5Q13144 721 aaKnown RBP7.25□□□□□ -1.25
PDGFC-203ENST00000502773 PEX6Q13608 980 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 CES4AQ5XG92 561 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 PPP2R2DQ66LE6 453 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 ACSM2BQ68CK6 577 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 GLYATQ6IB77 296 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 CAPN13Q6MZZ7 669 aaPredicted RBP7.25□□□□□ -1.25
PDGFC-203ENST00000502773 FBXO46Q6PJ61 603 aaPredicted RBP7.25□□□□□ -1.25
PDGFC-203ENST00000502773 RSPO2Q6UXX9 243 aaPredicted RBP7.25□□□□□ -1.25
PDGFC-203ENST00000502773 TRIM46Q7Z4K8 759 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 NLRP8Q86W28 1048 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 CROCCP3Q8IVE0 287 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 CRIPAKQ8N1N5 446 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 ELMO1Q92556 727 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 GLMNQ92990 594 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 CGREF1Q99674 301 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 EFCAB11Q9BUY7 163 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 RNF38Q9H0F5 515 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 BRD9Q9H8M2 597 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 FAM120CQ9NX05 1096 aaKnown RBP7.25□□□□□ -1.25
PDGFC-203ENST00000502773 IL36AQ9UHA7 158 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 OR51B4Q9Y5P0 310 aa7.25□□□□□ -1.25
PDGFC-203ENST00000502773 ELOVL7A1L3X0 281 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 MANBAO00462 879 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 BNIP3LO60238 219 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 EPN2O95208 641 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 SIX3O95343 332 aaPredicted RBP7.24□□□□□ -1.25
PDGFC-203ENST00000502773 OXSR1O95747 527 aaPredicted RBP7.24□□□□□ -1.25
PDGFC-203ENST00000502773 PRR35P0CG20 571 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 CTNNB1P35222 781 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 SPINT3P49223 89 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 PGFP49763 221 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 RAB15P59190 212 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 RPS14P62263 151 aaKnown RBP7.24□□□□□ -1.25
PDGFC-203ENST00000502773 MRPL28Q13084 256 aaKnown RBP7.24□□□□□ -1.25
PDGFC-203ENST00000502773 ITGADQ13349 1161 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 GRM2Q14416 872 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 ZNF805Q5CZA5 627 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 ATXN7L2Q5T6C5 722 aaPredicted RBP7.24□□□□□ -1.25
PDGFC-203ENST00000502773 GPRC6AQ5T6X5 926 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 LPCAT4Q643R3 524 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.24□□□□□ -1.25
PDGFC-203ENST00000502773 SLC15A3Q8IY34 581 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 CLEC4FQ8N1N0 589 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 BEND7Q8N7W2 519 aaPredicted RBP7.24□□□□□ -1.25
PDGFC-203ENST00000502773 TSPAN14Q8NG11 270 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 OR4F6Q8NGB9 312 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 FBXL8Q96CD0 374 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 CNBD2Q96M20 576 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 NSMCE3Q96MG7 304 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 ZIC5Q96T25 663 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 PITHD1Q9GZP4 211 aaPredicted RBP7.24□□□□□ -1.25
PDGFC-203ENST00000502773 KCNH6Q9H252 994 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 ZNF304Q9HCX3 659 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 OBP2AQ9NY56 170 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 DNAJB9Q9UBS3 223 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 BTRCQ9Y297 605 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 MRPL42Q9Y6G3 142 aaKnown RBP7.24□□□□□ -1.25
PDGFC-203ENST00000502773 DNMT3AQ9Y6K1 912 aaPredicted RBP7.24□□□□□ -1.25
PDGFC-203ENST00000502773 TMEM233B4DJY2 109 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 CCRL2O00421 344 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 AURKAO14965 403 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 CLOCKO15516 846 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 TGM5O43548 720 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 WBP4O75554 376 aaKnown RBP7.24□□□□□ -1.25
PDGFC-203ENST00000502773 H6PDO95479 791 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 GUCA1CO95843 209 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 SRCP12931 536 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 TXNL4AP83876 142 aaKnown RBP7.24□□□□□ -1.25
PDGFC-203ENST00000502773 ABHD18Q0P651 414 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 TEAD4Q15561 434 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 ATP6AP1Q15904 470 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 CYP2A13Q16696 494 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 SPIN4Q56A73 249 aa7.24□□□□□ -1.25
PDGFC-203ENST00000502773 CTSL3PQ5NE16 218 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms