RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 OARD1Q9Y530 152 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 U3KQA8 63 aa13.19□□□□□ -0.3
CPNE1-227ENST00000498056 ZNF292O60281 2723 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 MDC1Q14676 2089 aaKnown RBP13.18□□□□□ -0.3
CPNE1-227ENST00000498056 LILRA5A6NI73 299 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 SYCE1LA8MT33 242 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 GFYI3L273 518 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 UBXN8O00124 270 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 MYO1CO00159 1063 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 PPM1DO15297 605 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 NUDT21O43809 227 aaKnown RBP13.18□□□□□ -0.3
CPNE1-227ENST00000498056 GLB1P16278 677 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 PKLRP30613 574 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 SHMT2P34897 504 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 CCT5P48643 541 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 MAGOHP61326 146 aaKnown RBP13.18□□□□□ -0.3
CPNE1-227ENST00000498056 SLC18A2Q05940 514 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 CCDC157Q569K6 752 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 TNFAIP8L3Q5GJ75 292 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 PERM1Q5SV97 790 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 CDHR3Q6ZTQ4 885 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 ISCA2Q86U28 154 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 EXOC3L1Q86VI1 746 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 GPSM1Q86YR5 675 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 SYTL1Q8IYJ3 562 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 BANPQ8N9N5 519 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 OR9A1PQ8NGU1 263 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 OR10G6Q8NH81 332 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 STAG3L4Q8TBR4 150 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 IFI44Q8TCB0 444 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 NETO1Q8TDF5 533 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 DLG3Q92796 817 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 SH3KBP1Q96B97 665 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 ALKBH8Q96BT7 664 aaKnown RBP13.18□□□□□ -0.3
CPNE1-227ENST00000498056 ATP6V1G3Q96LB4 118 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 GPR78Q96P69 363 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 ATOH8Q96SQ7 321 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 PKP4Q99569 1192 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 NRTNQ99748 197 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 SH3GL2Q99962 352 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 RAB11FIP5Q9BXF6 653 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 SLC12A9Q9BXP2 914 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.18□□□□□ -0.3
CPNE1-227ENST00000498056 C12orf65Q9H3J6 166 aaKnown RBP13.18□□□□□ -0.3
CPNE1-227ENST00000498056 ABCF3Q9NUQ8 709 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 KCNK4Q9NYG8 393 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 WWOXQ9NZC7 414 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 NUDT4Q9NZJ9 180 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 CD274Q9NZQ7 290 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 TMEM216Q9P0N5 145 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 SPATA7Q9P0W8 599 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 DCDC2Q9UHG0 476 aa13.18□□□□□ -0.3
CPNE1-227ENST00000498056 GSAPA4D1B5 854 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 ANXA5P08758 320 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 RBP1P09455 135 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 CKMT1AP12532 417 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 GFAPP14136 432 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 CKMT2P17540 419 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 HPDP32754 393 aaPredicted RBP13.17□□□□□ -0.3
CPNE1-227ENST00000498056 RAB28P51157 221 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 DUSP3P51452 185 aaPredicted RBP13.17□□□□□ -0.3
CPNE1-227ENST00000498056 LIMK1P53667 647 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 AP1S2P56377 157 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 GRB7Q14451 532 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 TGFBIQ15582 683 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 HSP90B2PQ58FF3 399 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 SH2D5Q6ZV89 423 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 OOSP2Q86WS3 158 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 RASGRP3Q8IV61 690 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 ANKRD42Q8N9B4 389 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 Q8N9G6 341 aaPredicted RBP13.17□□□□□ -0.3
CPNE1-227ENST00000498056 LMNTD1Q8N9Z9 388 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 FBXO15Q8NCQ5 510 aaPredicted RBP13.17□□□□□ -0.3
CPNE1-227ENST00000498056 PPFIBP2Q8ND30 876 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 DEFB124Q8NES8 71 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 OR6C4Q8NGE1 309 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 RHEBL1Q8TAI7 183 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 TCP10LQ8TDR4 215 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 RSC1A1Q92681 617 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 TLCD1Q96CP7 247 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 AHCYL2Q96HN2 611 aaKnown RBP13.17□□□□□ -0.3
CPNE1-227ENST00000498056 FAM111AQ96PZ2 611 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 MRPL57Q9BQC6 102 aaKnown RBP13.17□□□□□ -0.3
CPNE1-227ENST00000498056 SRMSQ9H3Y6 488 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 KCNK9Q9NPC2 374 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 STOX2Q9P2F5 926 aaPredicted RBP13.17□□□□□ -0.3
CPNE1-227ENST00000498056 SLC17A7Q9P2U7 560 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 CDV3Q9UKY7 258 aaKnown RBP13.17□□□□□ -0.3
CPNE1-227ENST00000498056 EMCNQ9ULC0 261 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 GRID1Q9ULK0 1009 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 ACTL7BQ9Y614 415 aa13.17□□□□□ -0.3
CPNE1-227ENST00000498056 PCNX2A6NKB5 2137 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 EME2A4GXA9 379 aaPredicted RBP13.16□□□□□ -0.3
CPNE1-227ENST00000498056 HMGB1P1B2RPK0 211 aaPredicted RBP13.16□□□□□ -0.3
CPNE1-227ENST00000498056 DUX1O43812 170 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 SMIM24O75264 130 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 SLC16A8O95907 504 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 TYRP1P17643 537 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 IMPA1P29218 277 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 ALDH4A1P30038 563 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms