RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 CDKL4Q5MAI5 379 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 CGB2Q6NT52 195 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 FRMD7Q6ZUT3 714 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 LRRC56Q8IYG6 542 aaPredicted RBP23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 TBC1D21Q8IYX1 336 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 ZNF483Q8TF39 744 aaPredicted RBP23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 CCDC138Q96M89 665 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 TRIM54Q9BYV2 358 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 SHCBP1LQ9BZQ2 653 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 SMOC1Q9H4F8 434 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 CAPN10Q9HC96 672 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 FGFR1OP2Q9NVK5 253 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 SUSD2Q9UGT4 822 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 TDRKHQ9Y2W6 561 aaKnown RBP23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 ZFC3H1O60293 1989 aaKnown RBP23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 EPORP19235 508 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 GRIK2Q13002 908 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 PTCHD3Q3KNS1 767 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 SLC25A45Q8N413 288 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 JPH3Q8WXH2 748 aaPredicted RBP23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 SKA1Q96BD8 255 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 CD244Q9BZW8 370 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 TRIT1Q9H3H1 467 aaKnown RBP23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 IL21RQ9HBE5 538 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 WWOXQ9NZC7 414 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 TMCO1Q9UM00 188 aa23.56■■□□□ 1.36
TNFRSF4-203ENST00000497869 S100BP04271 92 aaPredicted RBP23.55■■□□□ 1.36
TNFRSF4-203ENST00000497869 GIMD1P0DJR0 217 aa23.55■■□□□ 1.36
TNFRSF4-203ENST00000497869 GRK2P25098 689 aa23.55■■□□□ 1.36
TNFRSF4-203ENST00000497869 HNRNPKP61978 463 aaKnown RBP eCLIP23.55■■□□□ 1.36
TNFRSF4-203ENST00000497869 RCN2Q14257 317 aa23.55■■□□□ 1.36
TNFRSF4-203ENST00000497869 ATG16L1Q676U5 607 aa23.55■■□□□ 1.36
TNFRSF4-203ENST00000497869 AGTRAPQ6RW13 159 aa23.55■■□□□ 1.36
TNFRSF4-203ENST00000497869 TRIM42Q8IWZ5 723 aa23.55■■□□□ 1.36
TNFRSF4-203ENST00000497869 FAM46DQ8NEK8 389 aa23.55■■□□□ 1.36
TNFRSF4-203ENST00000497869 CHMP6Q96FZ7 201 aa23.55■■□□□ 1.36
TNFRSF4-203ENST00000497869 CAMK1GQ96NX5 476 aa23.55■■□□□ 1.36
TNFRSF4-203ENST00000497869 ELF4Q99607 663 aaPredicted RBP23.55■■□□□ 1.36
TNFRSF4-203ENST00000497869 LRFN3Q9BTN0 628 aa23.55■■□□□ 1.36
TNFRSF4-203ENST00000497869 GMNCA6NCL1 334 aa23.54■■□□□ 1.36
TNFRSF4-203ENST00000497869 AQP9O43315 295 aa23.54■■□□□ 1.36
TNFRSF4-203ENST00000497869 NPHS1O60500 1241 aa23.54■■□□□ 1.36
TNFRSF4-203ENST00000497869 EDF1O60869 148 aaKnown RBP23.54■■□□□ 1.36
TNFRSF4-203ENST00000497869 VIMP08670 466 aaKnown RBP23.54■■□□□ 1.36
TNFRSF4-203ENST00000497869 DRD4P21917 467 aa23.54■■□□□ 1.36
TNFRSF4-203ENST00000497869 PRDX3P30048 256 aaKnown RBP23.54■■□□□ 1.36
TNFRSF4-203ENST00000497869 OR2I1PQ8NGU4 316 aa23.54■■□□□ 1.36
TNFRSF4-203ENST00000497869 SLC37A2Q8TED4 501 aa23.54■■□□□ 1.36
TNFRSF4-203ENST00000497869 RAD51AP1Q96B01 352 aa23.54■■□□□ 1.36
TNFRSF4-203ENST00000497869 XKR8Q9H6D3 395 aa23.54■■□□□ 1.36
TNFRSF4-203ENST00000497869 INTS7Q9NVH2 962 aaKnown RBP23.54■■□□□ 1.36
TNFRSF4-203ENST00000497869 THAP1Q9NVV9 213 aa23.54■■□□□ 1.36
TNFRSF4-203ENST00000497869 SPASTQ9UBP0 616 aa23.54■■□□□ 1.36
TNFRSF4-203ENST00000497869 ZNF225Q9UK10 706 aa23.54■■□□□ 1.36
TNFRSF4-203ENST00000497869 CACNA1EQ15878 2313 aa23.54■■□□□ 1.36
TNFRSF4-203ENST00000497869 TMEM114B3SHH9 223 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 CFIP05156 583 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 HALP42357 657 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 NUBP1P53384 320 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 UBE2IP63279 158 aaKnown RBP23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 ELOCQ15369 112 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 ANKS6Q68DC2 871 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 GOLGA7Q7Z5G4 137 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 RAB44Q7Z6P3 723 aaPredicted RBP23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 SFRP1Q8N474 314 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 C2orf73Q8N5S3 287 aaPredicted RBP23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 TRPC4APQ8TEL6 797 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 OR4K3Q96R72 315 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 SEMA4BQ9NPR2 832 aaPredicted RBP23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 E7ENX8 843 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 CCNT2O60583 730 aaKnown RBP23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 H2AFYO75367 372 aaKnown RBP23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 STK16O75716 305 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 ERGP11308 486 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 MPSTP25325 297 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 HOXD12P35452 270 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 RXRGP48443 463 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 HNMTP50135 292 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 TAP2Q03519 686 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 CLCQ05315 142 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 TCF15Q12870 199 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 SF3A3Q12874 501 aaKnown RBP eCLIP23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 NAE1Q13564 534 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 DUOXA1Q1HG43 343 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 DEFB133Q30KQ1 61 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 CFAP157Q5JU67 520 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 LINC01555Q8NAE3 123 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 OR52E1Q8NGJ3 308 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 OR56A3Q8NH54 315 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 CNDP1Q96KN2 507 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 MVB12BQ9H7P6 319 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 PNPOQ9NVS9 261 aa23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 TDRD6O60522 2096 aaKnown RBP23.53■■□□□ 1.36
TNFRSF4-203ENST00000497869 FANCMQ8IYD8 2048 aa23.52■■□□□ 1.36
TNFRSF4-203ENST00000497869 B4DGG1 531 aa23.52■■□□□ 1.36
TNFRSF4-203ENST00000497869 LMO7DNF2Z398 122 aa23.52■■□□□ 1.36
TNFRSF4-203ENST00000497869 OR7A17O14581 309 aa23.52■■□□□ 1.36
TNFRSF4-203ENST00000497869 PRAMEF4O60810 478 aa23.52■■□□□ 1.36
TNFRSF4-203ENST00000497869 SH3BP2P78314 561 aa23.52■■□□□ 1.36
TNFRSF4-203ENST00000497869 ZNF423Q2M1K9 1284 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms