RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 C1QTNF3Q9BXJ4 246 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 ROGDIQ9GZN7 287 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 Q9H521 79 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 C1orf109Q9NX04 203 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 BTRCQ9Y297 605 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 PRSS21Q9Y6M0 314 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 DNAJA2O60884 412 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 FKBP9O95302 570 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 LINC00032P0C843 101 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 BTKQ06187 659 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 CSTF3Q12996 717 aaKnown RBP8.17□□□□□ -1.1
USP54-215ENST00000497106 NFATC4Q14934 902 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 SPATS1Q496A3 300 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 ANXA8L1Q5VT79 327 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 ST13P5Q8NFI4 369 aaPredicted RBP8.17□□□□□ -1.1
USP54-215ENST00000497106 AGAP11Q8TF27 550 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 ROPN1LQ96C74 230 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 PTCD3Q96EY7 689 aaKnown RBP8.17□□□□□ -1.1
USP54-215ENST00000497106 METTL2AQ96IZ6 378 aaKnown RBP8.17□□□□□ -1.1
USP54-215ENST00000497106 SH3GL3Q99963 347 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 MYOCQ99972 504 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 HOPXQ9BPY8 73 aaPredicted RBP8.17□□□□□ -1.1
USP54-215ENST00000497106 MUC13Q9H3R2 512 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 GSTO2Q9H4Y5 243 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 THEGQ9P2T0 379 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 ATXN10Q9UBB4 475 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 CYP8B1Q9UNU6 501 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 SLC12A4Q9UP95 1085 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 CORO2BQ9UQ03 480 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 RUVBL1Q9Y265 456 aaKnown RBP8.17□□□□□ -1.1
USP54-215ENST00000497106 TMEM98Q9Y2Y6 226 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 NUP205Q92621 2012 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 GNG14A0A1W2PPG7 69 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 PRR5-ARHGAP8B1AHC4 643 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 TNFRSF10CO14798 259 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 FKBP6O75344 327 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 SLC22A3O75751 556 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 RSL1D1O76021 490 aaKnown RBP8.17□□□□□ -1.1
USP54-215ENST00000497106 SLCO2B1O94956 709 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 SIX3O95343 332 aaPredicted RBP8.17□□□□□ -1.1
USP54-215ENST00000497106 HOXC4P09017 264 aaPredicted RBP8.17□□□□□ -1.1
USP54-215ENST00000497106 GSTM2P28161 218 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 NCALDP61601 193 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 DLG1Q12959 904 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 RBBP5Q15291 538 aaKnown RBP8.17□□□□□ -1.1
USP54-215ENST00000497106 CPSF6Q16630 551 aaKnown RBP eCLIP8.17□□□□□ -1.1
USP54-215ENST00000497106 RABEPKQ7Z6M1 372 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 TMPRSS11BQ86T26 416 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 ASB11Q8WXH4 323 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 KLK6Q92876 244 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 RHBDF1Q96CC6 855 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 GPR78Q96P69 363 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 LRRC3BQ96PB8 259 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 LENG8Q96PV6 779 aaPredicted RBP8.17□□□□□ -1.1
USP54-215ENST00000497106 SMIM14Q96QK8 99 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 FAIM2Q9BWQ8 316 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 C1QTNF2Q9BXJ5 285 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 SLC40A1Q9NP59 571 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 ARMCX1Q9P291 453 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 DUSP12Q9UNI6 340 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 PCDHGA2Q9Y5H1 932 aa8.17□□□□□ -1.1
USP54-215ENST00000497106 AGAP14A8MT82 685 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 PEX11AO75192 247 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 SERPIND1P05546 499 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 TSPAN8P19075 237 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 CCR7P32248 378 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 S100A3P33764 101 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 CCR8P51685 355 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 CLCNKAP51800 687 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 RPL38P63173 70 aaKnown RBP8.16□□□□□ -1.1
USP54-215ENST00000497106 TBL3Q12788 808 aaKnown RBP8.16□□□□□ -1.1
USP54-215ENST00000497106 AP5B1Q2VPB7 878 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 PTCHD3Q3KNS1 767 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 PDCD4Q53EL6 469 aaKnown RBP8.16□□□□□ -1.1
USP54-215ENST00000497106 C6orf10Q5SRN2 563 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 ADGRG6Q86SQ4 1221 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 SLC9B2Q86UD5 537 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 ZSWIM9Q86XI8 627 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 HID1Q8IV36 788 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 CAMKK1Q8N5S9 505 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 DEFB123Q8N688 67 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 SDCCAG3Q96C92 435 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 MCMBPQ9BTE3 642 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.16□□□□□ -1.1
USP54-215ENST00000497106 PDE10AQ9Y233 779 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 PCDHB11Q9Y5F2 797 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 MANBAO00462 879 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 KLK8O60259 260 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 CBX6O95503 412 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 PPIBP23284 216 aaKnown RBP8.16□□□□□ -1.1
USP54-215ENST00000497106 ACTR1BP42025 376 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 BDKRB1P46663 353 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 ACTR1AP61163 376 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 GGTA1PQ4G0N0 100 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 AGBL4Q5VU57 503 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 CLEC6AQ6EIG7 209 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 FOXR1Q6PIV2 292 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 TAF8Q7Z7C8 310 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 TMEM132CQ8N3T6 1108 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 IL17RCQ8NAC3 791 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms