RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 ATP1A3P13637 1013 aa11.19□□□□□ -0.62
ATG3-209ENST00000496423 UCHL3P15374 230 aa11.19□□□□□ -0.62
ATG3-209ENST00000496423 AMPD1P23109 780 aa11.19□□□□□ -0.62
ATG3-209ENST00000496423 HOXC12P31275 282 aa11.19□□□□□ -0.62
ATG3-209ENST00000496423 TFF3Q07654 80 aa11.19□□□□□ -0.62
ATG3-209ENST00000496423 MAN2A1Q16706 1144 aa11.19□□□□□ -0.62
ATG3-209ENST00000496423 FAM214AQ32MH5 1076 aa11.19□□□□□ -0.62
ATG3-209ENST00000496423 ATP13A5Q4VNC0 1218 aa11.19□□□□□ -0.62
ATG3-209ENST00000496423 KHDC1Q4VXA5 237 aaKnown RBP11.19□□□□□ -0.62
ATG3-209ENST00000496423 RASGEF1AQ8N9B8 481 aa11.19□□□□□ -0.62
ATG3-209ENST00000496423 TMEM178AQ8NBL3 297 aa11.19□□□□□ -0.62
ATG3-209ENST00000496423 OR2L2Q8NH16 312 aa11.19□□□□□ -0.62
ATG3-209ENST00000496423 RBM41Q96IZ5 413 aaKnown RBP11.19□□□□□ -0.62
ATG3-209ENST00000496423 GPATCH1Q9BRR8 931 aaKnown RBP11.19□□□□□ -0.62
ATG3-209ENST00000496423 FAM60AQ9NP50 221 aa11.19□□□□□ -0.62
ATG3-209ENST00000496423 RASSF1Q9NS23 344 aa11.19□□□□□ -0.62
ATG3-209ENST00000496423 SLC22A11Q9NSA0 550 aa11.19□□□□□ -0.62
ATG3-209ENST00000496423 RIC8BQ9NVN3 520 aa11.19□□□□□ -0.62
ATG3-209ENST00000496423 LRFN1Q9P244 771 aa11.19□□□□□ -0.62
ATG3-209ENST00000496423 RNF6Q9Y252 685 aa11.19□□□□□ -0.62
ATG3-209ENST00000496423 PES1O00541 588 aaKnown RBP11.18□□□□□ -0.62
ATG3-209ENST00000496423 DSCR3O14972 297 aa11.18□□□□□ -0.62
ATG3-209ENST00000496423 POLBP06746 335 aa11.18□□□□□ -0.62
ATG3-209ENST00000496423 CD46P15529 392 aa11.18□□□□□ -0.62
ATG3-209ENST00000496423 MSH3P20585 1137 aa11.18□□□□□ -0.62
ATG3-209ENST00000496423 FANCCQ00597 558 aa11.18□□□□□ -0.62
ATG3-209ENST00000496423 ZNF33BQ06732 778 aa11.18□□□□□ -0.62
ATG3-209ENST00000496423 CAMK4Q16566 473 aa11.18□□□□□ -0.62
ATG3-209ENST00000496423 TPD52L1Q16890 204 aaPredicted RBP11.18□□□□□ -0.62
ATG3-209ENST00000496423 FNBP1LQ5T0N5 605 aa11.18□□□□□ -0.62
ATG3-209ENST00000496423 FBXW10Q5XX13 1052 aa11.18□□□□□ -0.62
ATG3-209ENST00000496423 NLRP9Q7RTR0 991 aa11.18□□□□□ -0.62
ATG3-209ENST00000496423 HORMAD2Q8N7B1 307 aa11.18□□□□□ -0.62
ATG3-209ENST00000496423 TMEM158Q8WZ71 300 aa11.18□□□□□ -0.62
ATG3-209ENST00000496423 MIEF2Q96C03 454 aa11.18□□□□□ -0.62
ATG3-209ENST00000496423 EID2BQ96D98 161 aa11.18□□□□□ -0.62
ATG3-209ENST00000496423 SARGQ9BW04 601 aa11.18□□□□□ -0.62
ATG3-209ENST00000496423 UCK2Q9BZX2 261 aa11.18□□□□□ -0.62
ATG3-209ENST00000496423 TSPAN10Q9H1Z9 355 aaPredicted RBP11.18□□□□□ -0.62
ATG3-209ENST00000496423 NDST4Q9H3R1 872 aa11.18□□□□□ -0.62
ATG3-209ENST00000496423 SAMSN1Q9NSI8 373 aaKnown RBP11.18□□□□□ -0.62
ATG3-209ENST00000496423 ZNF711Q9Y462 761 aa11.18□□□□□ -0.62
ATG3-209ENST00000496423 CPAMD8Q8IZJ3 1885 aa11.18□□□□□ -0.62
ATG3-209ENST00000496423 SMAPO00193 183 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 DDX3XO00571 662 aaKnown RBP eCLIP11.17□□□□□ -0.621e-7■■■□□ 15
ATG3-209ENST00000496423 ADAM10O14672 748 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 RASGRF2O14827 1237 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 TPOP07202 933 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 CHRNB2P17787 502 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 UGT1A1P22309 533 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 CCNCP24863 283 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 AKT1P31749 480 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 CD86P42081 329 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 NKX6-1P78426 367 aaPredicted RBP11.17□□□□□ -0.62
ATG3-209ENST00000496423 AP1B1Q10567 949 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 ITGA9Q13797 1035 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 PPP2R5EQ16537 467 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 CLEC16AQ2KHT3 1053 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 CCDC122Q5T0U0 273 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 PAMR1Q6UXH9 720 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 ACAD11Q709F0 780 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 CHSY3Q70JA7 882 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 CDC20BQ86Y33 519 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 TMEM151BQ8IW70 566 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 ELOA2Q8IYF1 753 aaPredicted RBP11.17□□□□□ -0.62
ATG3-209ENST00000496423 CFAP206Q8IYR0 622 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 CPSF7Q8N684 471 aaKnown RBP11.17□□□□□ -0.62
ATG3-209ENST00000496423 TTC29Q8NA56 475 aaPredicted RBP11.17□□□□□ -0.62
ATG3-209ENST00000496423 ARRDC2Q8TBH0 407 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 DTX3LQ8TDB6 740 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 HDAC10Q969S8 669 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 MVB12BQ9H7P6 319 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 PARVAQ9NVD7 372 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 FAM8A1Q9UBU6 413 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 ZNF282Q9UDV7 671 aaPredicted RBP11.17□□□□□ -0.62
ATG3-209ENST00000496423 RWDD2AQ9UIY3 292 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 C3orf18Q9UK00 162 aa11.17□□□□□ -0.62
ATG3-209ENST00000496423 FN1P02751 2386 aaKnown RBP11.17□□□□□ -0.62
ATG3-209ENST00000496423 FBN1P35555 2871 aaKnown RBP11.16□□□□□ -0.62
ATG3-209ENST00000496423 A0A0J9YY10 115 aa11.16□□□□□ -0.62
ATG3-209ENST00000496423 VSTM2BA6NLU5 285 aa11.16□□□□□ -0.62
ATG3-209ENST00000496423 KDM1AO60341 852 aa11.16□□□□□ -0.62
ATG3-209ENST00000496423 WISP2O76076 250 aa11.16□□□□□ -0.62
ATG3-209ENST00000496423 IFNA2P01563 188 aa11.16□□□□□ -0.62
ATG3-209ENST00000496423 MIPP30301 263 aa11.16□□□□□ -0.62
ATG3-209ENST00000496423 PTGS2P35354 604 aa11.16□□□□□ -0.62
ATG3-209ENST00000496423 KIR2DL3P43628 341 aa11.16□□□□□ -0.62
ATG3-209ENST00000496423 GABRA4P48169 554 aa11.16□□□□□ -0.62
ATG3-209ENST00000496423 TMPRSS15P98073 1019 aa11.16□□□□□ -0.62
ATG3-209ENST00000496423 KLC1Q07866 573 aa11.16□□□□□ -0.62
ATG3-209ENST00000496423 BECN1Q14457 450 aa11.16□□□□□ -0.62
ATG3-209ENST00000496423 GRM7Q14831 915 aa11.16□□□□□ -0.62
ATG3-209ENST00000496423 IFI16Q16666 785 aaKnown RBP11.16□□□□□ -0.62
ATG3-209ENST00000496423 BOLA3Q53S33 107 aa11.16□□□□□ -0.62
ATG3-209ENST00000496423 TCTE1Q5JU00 501 aa11.16□□□□□ -0.62
ATG3-209ENST00000496423 ERICH6BQ5W0A0 696 aa11.16□□□□□ -0.62
ATG3-209ENST00000496423 PPP1R2P3Q6NXS1 205 aa11.16□□□□□ -0.62
ATG3-209ENST00000496423 ARSKQ6UWY0 536 aa11.16□□□□□ -0.62
ATG3-209ENST00000496423 MON1BQ7L1V2 547 aa11.16□□□□□ -0.62
ATG3-209ENST00000496423 ZZZ3Q8IYH5 903 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms