RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 LRRC73Q5JTD7 316 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 ASTLQ6HA08 431 aaPredicted RBP10.81□□□□□ -0.68
CMSS1-208ENST00000496116 B3GNT6Q6ZMB0 384 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 RFLNAQ6ZTI6 216 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 NEK10Q6ZWH5 1172 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 OTOP2Q7RTS6 562 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 ALDH16A1Q8IZ83 802 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 DHRSXQ8N5I4 330 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 CHST14Q8NCH0 376 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 OR2A12Q8NGT7 310 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 MAGEE2Q8TD90 523 aaPredicted RBP10.81□□□□□ -0.68
CMSS1-208ENST00000496116 BPIFB1Q8TDL5 484 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 CYGBQ8WWM9 190 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 ZNF583Q96ND8 569 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 OR52E6Q96RD3 313 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 HEPHQ9BQS7 1158 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 ACPTQ9BZG2 426 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 RBM38Q9H0Z9 239 aaKnown RBP10.81□□□□□ -0.68
CMSS1-208ENST00000496116 FAM83DQ9H4H8 585 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 RMND5AQ9H871 391 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 SPHK2Q9NRA0 654 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 HCFC1R1Q9NWW0 138 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 TUBA8Q9NY65 449 aaPredicted RBP10.81□□□□□ -0.68
CMSS1-208ENST00000496116 IRAK3Q9Y616 596 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 A0A087WXM4 84 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 ZBBXA8MT70 800 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 QSOX1O00391 747 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 PLOD2O00469 737 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 DFNA5O60443 496 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 AP2A2O94973 939 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 FTH1P02794 183 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 BCKDHAP12694 445 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 PTPN2P17706 415 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 NELFEP18615 380 aaKnown RBP10.81□□□□□ -0.68
CMSS1-208ENST00000496116 EPORP19235 508 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 POLR2EP19388 210 aaKnown RBP10.81□□□□□ -0.68
CMSS1-208ENST00000496116 PRPH2P23942 346 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 VIPR1P32241 457 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 SLC6A12P48065 614 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 CLDN8P56748 225 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 DCDC1P59894 354 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 TEAD2Q15562 447 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 SUSD1Q6UWL2 747 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 ADIPOR2Q86V24 386 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 RIMKLAQ8IXN7 391 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 ZNF786Q8N393 782 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 OR10A6Q8NH74 314 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 NUDT8Q8WV74 236 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 ASZ1Q8WWH4 475 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 FIG4Q92562 907 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 POP5Q969H6 163 aaKnown RBP10.81□□□□□ -0.68
CMSS1-208ENST00000496116 TIFAQ96CG3 184 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 ZNF639Q9UID6 485 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 INVSQ9Y283 1065 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 MTCL1Q9Y4B5 1905 aaKnown RBP10.8□□□□□ -0.68
CMSS1-208ENST00000496116 ELOVL7A1L3X0 281 aa10.8□□□□□ -0.68
CMSS1-208ENST00000496116 TRIM43BA6NCK2 446 aa10.8□□□□□ -0.68
CMSS1-208ENST00000496116 GFYI3L273 518 aa10.8□□□□□ -0.68
CMSS1-208ENST00000496116 ERN1O75460 977 aaKnown RBP10.8□□□□□ -0.68
CMSS1-208ENST00000496116 CAPGP40121 348 aa10.8□□□□□ -0.68
CMSS1-208ENST00000496116 EPHA5P54756 1037 aa10.8□□□□□ -0.68
CMSS1-208ENST00000496116 KCNC3Q14003 757 aa10.8□□□□□ -0.68
CMSS1-208ENST00000496116 PTCHD3Q3KNS1 767 aa10.8□□□□□ -0.68
CMSS1-208ENST00000496116 RUNDC3AQ59EK9 446 aa10.8□□□□□ -0.68
CMSS1-208ENST00000496116 ABRAXAS1Q6UWZ7 409 aa10.8□□□□□ -0.68
CMSS1-208ENST00000496116 FKBP9P1Q75LS8 142 aa10.8□□□□□ -0.68
CMSS1-208ENST00000496116 RTL10Q7L3V2 364 aa10.8□□□□□ -0.68
CMSS1-208ENST00000496116 KRTCAP2Q8N6L1 136 aa10.8□□□□□ -0.68
CMSS1-208ENST00000496116 L3MBTL4Q8NA19 623 aa10.8□□□□□ -0.68
CMSS1-208ENST00000496116 ELMO1Q92556 727 aa10.8□□□□□ -0.68
CMSS1-208ENST00000496116 CLP1Q92989 425 aaKnown RBP10.8□□□□□ -0.68
CMSS1-208ENST00000496116 TRIM43Q96BQ3 446 aaPredicted RBP10.8□□□□□ -0.68
CMSS1-208ENST00000496116 SDCCAG3Q96C92 435 aa10.8□□□□□ -0.68
CMSS1-208ENST00000496116 TCEAL4Q96EI5 215 aa10.8□□□□□ -0.68
CMSS1-208ENST00000496116 CMTM7Q96FZ5 175 aa10.8□□□□□ -0.68
CMSS1-208ENST00000496116 BEGAINQ9BUH8 593 aa10.8□□□□□ -0.68
CMSS1-208ENST00000496116 TLR9Q9NR96 1032 aa10.8□□□□□ -0.68
CMSS1-208ENST00000496116 DNAJC11Q9NVH1 559 aa10.8□□□□□ -0.68
CMSS1-208ENST00000496116 ERVW-1Q9UQF0 538 aa10.8□□□□□ -0.68
CMSS1-208ENST00000496116 NEUROG3Q9Y4Z2 214 aa10.8□□□□□ -0.68
CMSS1-208ENST00000496116 FADS3Q9Y5Q0 445 aa10.8□□□□□ -0.68
CMSS1-208ENST00000496116 A0A1B0GTW7 788 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 SOBPA7XYQ1 873 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 SCELO95171 688 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 BMP10O95393 424 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 MT-ND1P03886 318 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 GNAO1P09471 354 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 LINC00271P0C7V0 271 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 ACPPP15309 386 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 XPAP23025 273 aaPredicted RBP10.79□□□□□ -0.68
CMSS1-208ENST00000496116 S100A3P33764 101 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 LRRC26Q2I0M4 334 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 LY6G5CQ5SRR4 150 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 PATL1Q86TB9 770 aaKnown RBP10.79□□□□□ -0.68
CMSS1-208ENST00000496116 VRK3Q8IV63 474 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 TMEM132CQ8N3T6 1108 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 TRAM1L1Q8N609 369 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 ZNF548Q8NEK5 533 aaPredicted RBP10.79□□□□□ -0.68
CMSS1-208ENST00000496116 OR52E4Q8NGH9 312 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 CLHC1Q8NHS4 586 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms