RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 PNLIPP16233 465 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 GLB1P16278 677 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 TGM1P22735 817 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 SHMT2P34897 504 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 GPR3P46089 330 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 PGGT1BP53609 377 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 LIMK1P53667 647 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 EPHA4P54764 986 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 NAA20P61599 178 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 HHEXQ03014 270 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 ASPHQ12797 758 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 PPP1R3AQ16821 1122 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.09□□□□□ -0.47
SNX17-208ENST00000493711 N4BP2L1Q5TBK1 243 aaPredicted RBP12.09□□□□□ -0.47
SNX17-208ENST00000493711 SULT1C3Q6IMI6 304 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 METTL2BQ6P1Q9 378 aaKnown RBP12.09□□□□□ -0.47
SNX17-208ENST00000493711 SBSNQ6UWP8 590 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 ARL14Q8N4G2 192 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 SPATA6LQ8N4H0 392 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 EID2Q8N6I1 236 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 OR5AR1Q8NGP9 310 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 OR9A1PQ8NGU1 263 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 NAT6Q93015 286 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 ARL8AQ96BM9 186 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 CDC6Q99741 560 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 PARD6AQ9NPB6 346 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 KCNK9Q9NPC2 374 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 ARL15Q9NXU5 204 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 NKIRAS1Q9NYS0 192 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 NUDT4Q9NZJ9 180 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 PADI4Q9UM07 663 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 PDE10AQ9Y233 779 aa12.09□□□□□ -0.47
SNX17-208ENST00000493711 TRIM38O00635 465 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 SIGLEC6O43699 453 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 PLIN3O60664 434 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 IPO13O94829 963 aaKnown RBP12.08□□□□□ -0.48
SNX17-208ENST00000493711 EML2O95834 649 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 SYF2O95926 243 aaKnown RBP12.08□□□□□ -0.48
SNX17-208ENST00000493711 CCND1P24385 295 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 GLRBP48167 497 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 PUM1Q14671 1186 aaKnown RBP eCLIP12.08□□□□□ -0.48
SNX17-208ENST00000493711 TGFBIQ15582 683 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 TECRLQ5HYJ1 363 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 ANKS6Q68DC2 871 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 TMEM26Q6ZUK4 368 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 RAB44Q7Z6P3 723 aaPredicted RBP12.08□□□□□ -0.48
SNX17-208ENST00000493711 SLC22A9Q8IVM8 553 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 SLC35F3Q8IY50 421 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 PLD6Q8N2A8 252 aaKnown RBP12.08□□□□□ -0.48
SNX17-208ENST00000493711 ARFGAP2Q8N6H7 521 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 KYQ8NBH2 561 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 OR2I1PQ8NGU4 316 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 HMGCLL1Q8TB92 370 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 LCN9Q8WX39 176 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 PTERQ96BW5 349 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 FBXL8Q96CD0 374 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 CNTNAP3BQ96NU0 1288 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 ATOH8Q96SQ7 321 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 CNTNAP3Q9BZ76 1288 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 CNOT10Q9H9A5 744 aaKnown RBP12.08□□□□□ -0.48
SNX17-208ENST00000493711 OR6C2Q9NZP2 312 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 CD274Q9NZQ7 290 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 TMEM216Q9P0N5 145 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 SIRPGQ9P1W8 387 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 XPR1Q9UBH6 696 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 ADAMTS6Q9UKP5 1117 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 TDRKHQ9Y2W6 561 aaKnown RBP12.08□□□□□ -0.48
SNX17-208ENST00000493711 TNPO3Q9Y5L0 923 aaKnown RBP12.08□□□□□ -0.48
SNX17-208ENST00000493711 CFAP20Q9Y6A4 193 aaKnown RBP12.08□□□□□ -0.48
SNX17-208ENST00000493711 TNRC6BQ9UPQ9 1833 aaKnown RBP12.08□□□□□ -0.48
SNX17-208ENST00000493711 CFAP47Q6ZTR5 3102 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 FANCMQ8IYD8 2048 aa12.08□□□□□ -0.48
SNX17-208ENST00000493711 PLXNB3Q9ULL4 1909 aa12.07□□□□□ -0.48
SNX17-208ENST00000493711 NCOR2Q9Y618 2525 aa12.07□□□□□ -0.48
SNX17-208ENST00000493711 KMT2BQ9UMN6 2715 aaPredicted RBP12.07□□□□□ -0.48
SNX17-208ENST00000493711 TRBV23OR9-2A0A075B6M9 112 aa12.07□□□□□ -0.48
SNX17-208ENST00000493711 FOXO6A8MYZ6 492 aa12.07□□□□□ -0.48
SNX17-208ENST00000493711 SUPT3HB4E1H0 165 aa12.07□□□□□ -0.48
SNX17-208ENST00000493711 MATN2O00339 956 aa12.07□□□□□ -0.48
SNX17-208ENST00000493711 SPAG7O75391 227 aa12.07□□□□□ -0.48
SNX17-208ENST00000493711 SUPT3HO75486 399 aa12.07□□□□□ -0.48
SNX17-208ENST00000493711 LDOC1O95751 146 aaPredicted RBP12.07□□□□□ -0.48
SNX17-208ENST00000493711 PROCP04070 461 aa12.07□□□□□ -0.48
SNX17-208ENST00000493711 CKMT1AP12532 417 aa12.07□□□□□ -0.48
SNX17-208ENST00000493711 ATP5F1P24539 256 aaPredicted RBP12.07□□□□□ -0.48
SNX17-208ENST00000493711 BDKRB1P46663 353 aa12.07□□□□□ -0.48
SNX17-208ENST00000493711 RAB28P51157 221 aa12.07□□□□□ -0.48
SNX17-208ENST00000493711 PRKAA2P54646 552 aa12.07□□□□□ -0.48
SNX17-208ENST00000493711 ALDH18A1P54886 795 aaKnown RBP12.07□□□□□ -0.48
SNX17-208ENST00000493711 NR1D2Q14995 579 aa12.07□□□□□ -0.48
SNX17-208ENST00000493711 PLCL1Q15111 1095 aa12.07□□□□□ -0.48
SNX17-208ENST00000493711 OR4D1Q15615 310 aa12.07□□□□□ -0.48
SNX17-208ENST00000493711 PHKG1Q16816 387 aa12.07□□□□□ -0.48
SNX17-208ENST00000493711 TTMPQ5BVD1 217 aa12.07□□□□□ -0.48
SNX17-208ENST00000493711 ZNF438Q7Z4V0 828 aa12.07□□□□□ -0.48
SNX17-208ENST00000493711 NAXDQ8IW45 347 aa12.07□□□□□ -0.48
SNX17-208ENST00000493711 CCDC63Q8NA47 563 aa12.07□□□□□ -0.48
SNX17-208ENST00000493711 PDPRQ8NCN5 879 aa12.07□□□□□ -0.48
SNX17-208ENST00000493711 OR52E1Q8NGJ3 308 aa12.07□□□□□ -0.48
SNX17-208ENST00000493711 TCP10LQ8TDR4 215 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms