RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-208ENST00000493507 TMEM25Q86YD3 366 aa4.96□□□□□ -1.62
CCNB3-208ENST00000493507 ADGRF3Q8IZF5 1079 aa4.96□□□□□ -1.62
CCNB3-208ENST00000493507 C1orf131Q8NDD1 294 aaKnown RBP4.96□□□□□ -1.62
CCNB3-208ENST00000493507 OR52K2Q8NGK3 314 aa4.96□□□□□ -1.62
CCNB3-208ENST00000493507 SLC2A12Q8TD20 617 aa4.96□□□□□ -1.62
CCNB3-208ENST00000493507 ZFPM2Q8WW38 1151 aa4.96□□□□□ -1.62
CCNB3-208ENST00000493507 CCDC47Q96A33 483 aaKnown RBP4.96□□□□□ -1.62
CCNB3-208ENST00000493507 VOPP1Q96AW1 172 aa4.96□□□□□ -1.62
CCNB3-208ENST00000493507 LMLNQ96KR4 655 aa4.96□□□□□ -1.62
CCNB3-208ENST00000493507 CPXM1Q96SM3 734 aa4.96□□□□□ -1.62
CCNB3-208ENST00000493507 PCDHB18PQ96TA0 734 aa4.96□□□□□ -1.62
CCNB3-208ENST00000493507 SYT11Q9BT88 431 aa4.96□□□□□ -1.62
CCNB3-208ENST00000493507 THAP9Q9H5L6 903 aa4.96□□□□□ -1.62
CCNB3-208ENST00000493507 ECT2Q9H8V3 914 aa4.96□□□□□ -1.62
CCNB3-208ENST00000493507 KIF9Q9HAQ2 790 aa4.96□□□□□ -1.62
CCNB3-208ENST00000493507 KIF17Q9P2E2 1029 aa4.96□□□□□ -1.62
CCNB3-208ENST00000493507 NOCTQ9UK39 431 aaKnown RBP4.96□□□□□ -1.62
CCNB3-208ENST00000493507 BTBD3Q9Y2F9 522 aa4.96□□□□□ -1.62
CCNB3-208ENST00000493507 NFE2L3Q9Y4A8 694 aa4.96□□□□□ -1.62
CCNB3-208ENST00000493507 GON4LQ3T8J9 2241 aa4.96□□□□□ -1.62
CCNB3-208ENST00000493507 CACNA1EQ15878 2313 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 SCN8AQ9UQD0 1980 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 ASCC3Q8N3C0 2202 aaKnown RBP4.95□□□□□ -1.62
CCNB3-208ENST00000493507 GOLGA6L7A0A1B0GV03 622 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 SLC22A23A1A5C7 686 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 BICDL2A1A5D9 508 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 AGAP5A6NIR3 686 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 C2CD4BA6NLJ0 364 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 C4orf47A7E2U8 309 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 E7EVH7 732 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 SGK1O00141 431 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 RNF103O00237 685 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 TAF4O00268 1085 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 CDX4O14627 284 aaPredicted RBP4.95□□□□□ -1.62
CCNB3-208ENST00000493507 P4HA2O15460 535 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 IRAK2O43187 625 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 FAM155BO75949 473 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 RTN3O95197 1032 aaPredicted RBP4.95□□□□□ -1.62
CCNB3-208ENST00000493507 ALDOCP09972 364 aaKnown RBP4.95□□□□□ -1.62
CCNB3-208ENST00000493507 CISD3P0C7P0 127 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 BCKDHBP21953 392 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 AVPR1AP37288 418 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 MMP13P45452 471 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 CPA2P48052 419 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 TUBP50607 506 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 YWHAGP61981 247 aaKnown RBP eCLIP4.95□□□□□ -1.62
CCNB3-208ENST00000493507 BST2Q10589 180 aaKnown RBP4.95□□□□□ -1.62
CCNB3-208ENST00000493507 PTP4A2Q12974 167 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 MAPRE1Q15691 268 aaKnown RBP4.95□□□□□ -1.62
CCNB3-208ENST00000493507 ITPRIPL2Q3MIP1 535 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 PLK5Q496M5 336 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 FAM133BQ5BKY9 247 aaKnown RBP4.95□□□□□ -1.62
CCNB3-208ENST00000493507 TCP11X2Q5H9J9 407 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 LIPMQ5VYY2 423 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 CAVIN1Q6NZI2 390 aaKnown RBP4.95□□□□□ -1.62
CCNB3-208ENST00000493507 SLC2A7Q6PXP3 512 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 FAM183BPQ6ZVS7 135 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 FAM57BQ71RH2 274 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 TAC4Q86UU9 113 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 RALGPS2Q86X27 583 aaPredicted RBP4.95□□□□□ -1.62
CCNB3-208ENST00000493507 FAM217AQ8IXS0 508 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 FAM71AQ8IYT1 594 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 ANKRD42Q8N9B4 389 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 MLKLQ8NB16 471 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 ANKRD52Q8NB46 1076 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 CSGALNACT1Q8TDX6 532 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 DQX1Q8TE96 717 aaKnown RBP4.95□□□□□ -1.62
CCNB3-208ENST00000493507 THAP4Q8WY91 577 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 NAP1L5Q96NT1 182 aaPredicted RBP4.95□□□□□ -1.62
CCNB3-208ENST00000493507 TUBGCP2Q9BSJ2 902 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 NDST4Q9H3R1 872 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 C8orf33Q9H7E9 229 aaPredicted RBP4.95□□□□□ -1.62
CCNB3-208ENST00000493507 UBE2TQ9NPD8 197 aaPredicted RBP4.95□□□□□ -1.62
CCNB3-208ENST00000493507 DUS2Q9NX74 493 aaKnown RBP4.95□□□□□ -1.62
CCNB3-208ENST00000493507 PLK2Q9NYY3 685 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 UXTQ9UBK9 157 aaPredicted RBP4.95□□□□□ -1.62
CCNB3-208ENST00000493507 RASAL2Q9UJF2 1139 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 DNAJC12Q9UKB3 198 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 NEU3Q9UQ49 428 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 NAALADL1Q9UQQ1 740 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 SNX10Q9Y5X0 201 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 SLCO1B1Q9Y6L6 691 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 CNOT1A5YKK6 2376 aaKnown RBP4.95□□□□□ -1.62
CCNB3-208ENST00000493507 CFAP47Q6ZTR5 3102 aa4.95□□□□□ -1.62
CCNB3-208ENST00000493507 SPEGQ15772 3267 aa4.94□□□□□ -1.62
CCNB3-208ENST00000493507 GTPBP10A4D1E9 387 aaKnown RBP4.94□□□□□ -1.62
CCNB3-208ENST00000493507 DNAJC9-AS1A6NH13 148 aa4.94□□□□□ -1.62
CCNB3-208ENST00000493507 SRRM3A6NNA2 597 aaPredicted RBP4.94□□□□□ -1.62
CCNB3-208ENST00000493507 F8VZ95 297 aa4.94□□□□□ -1.62
CCNB3-208ENST00000493507 HOXC11O43248 304 aaPredicted RBP4.94□□□□□ -1.62
CCNB3-208ENST00000493507 TULP3O75386 442 aa4.94□□□□□ -1.62
CCNB3-208ENST00000493507 GRAP2O75791 330 aa4.94□□□□□ -1.62
CCNB3-208ENST00000493507 HEXIM1O94992 359 aaKnown RBP4.94□□□□□ -1.62
CCNB3-208ENST00000493507 LETM1O95202 739 aaPredicted RBP4.94□□□□□ -1.62
CCNB3-208ENST00000493507 PAEPP09466 180 aa4.94□□□□□ -1.62
CCNB3-208ENST00000493507 VDRP11473 427 aa4.94□□□□□ -1.62
CCNB3-208ENST00000493507 PEPDP12955 493 aa4.94□□□□□ -1.62
CCNB3-208ENST00000493507 KRT5P13647 590 aa4.94□□□□□ -1.62
CCNB3-208ENST00000493507 HOXD9P28356 352 aaPredicted RBP4.94□□□□□ -1.62
CCNB3-208ENST00000493507 CORO1AP31146 461 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms