RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 CFLARO15519 480 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 ULK1O75385 1050 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 PSMG1O95456 288 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 C1orf105O95561 183 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 GPR89BP0CG08 455 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 MYCLP1P12525 358 aaPredicted RBP8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 GLULP15104 373 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 IMPA1P29218 277 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 HALP42357 657 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 DIO3P55073 304 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 MTTPP55157 894 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 KCNK10P57789 538 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 PFN3P60673 137 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 ACTR3P61158 418 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 PSME3P61289 254 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 RPL38P63173 70 aaKnown RBP8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 EMX2Q04743 252 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 RPA4Q13156 261 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 MAD2L1Q13257 205 aaPredicted RBP8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 SGCGQ13326 291 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 NAE1Q13564 534 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 LRP8Q14114 963 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 FGL2Q14314 439 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 NFE2L1Q14494 772 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 ZXDCQ2QGD7 858 aaPredicted RBP8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 AP5B1Q2VPB7 878 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 MAP7D1Q3KQU3 841 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 CCSMST1Q4G0I0 132 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 FBXO43Q4G163 708 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 TMEM259Q4ZIN3 620 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 SGO1Q5FBB7 561 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 XKR5Q6UX68 686 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 KIAA1324Q6UXG2 1013 aaKnown RBP8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 USP30Q70CQ3 517 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 TRIM46Q7Z4K8 759 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 PDZD3Q86UT5 571 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 KBTBD6Q86V97 674 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 AMZ2Q86W34 360 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 THOC6Q86W42 341 aaKnown RBP8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 HORMAD1Q86X24 394 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 FUNDC1Q8IVP5 155 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 SLC44A3Q8N4M1 653 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 ENDOVQ8N8Q3 282 aaKnown RBP8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 L3MBTL4Q8NA19 623 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 OR56A3Q8NH54 315 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 TSPEARQ8WU66 669 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 JADE3Q92613 823 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 KLK6Q92876 244 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 FOXJ1Q92949 421 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 PYCR2Q96C36 320 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 CCDC124Q96CT7 223 aaKnown RBP8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 SIPA1Q96FS4 1042 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 MED8Q96G25 268 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 HBEGFQ99075 208 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 C1QTNF2Q9BXJ5 285 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 ATG10Q9H0Y0 220 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 SLC6A17Q9H1V8 727 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 ELOVL6Q9H5J4 265 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 DCLRE1BQ9H816 532 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 UBE2ZQ9H832 354 aaPredicted RBP8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 MBNL1Q9NR56 388 aaKnown RBP8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 NOP53Q9NZM5 478 aaKnown RBP8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 LIMD1Q9UGP4 676 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 SLC22A14Q9Y267 594 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 NCKAP1Q9Y2A7 1128 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 POLR3HQ9Y535 204 aaPredicted RBP8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 DNMT3AQ9Y6K1 912 aaPredicted RBP8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 F5P12259 2224 aa8.9□□□□□ -0.98
SMARCC1-208ENST00000492896 CDH23Q9H251 3354 aa8.9□□□□□ -0.99
SMARCC1-208ENST00000492896 REV3LO60673 3130 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 FAM234BA2RU67 622 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 KLHL33A6NCF5 533 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 H0Y3Z8 333 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 CLGNO14967 610 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 KMOO15229 486 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 UGDHO60701 494 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 SLC22A3O75751 556 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 KRT36O76013 467 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 RSL1D1O76021 490 aaKnown RBP8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 PAK4O96013 591 aaPredicted RBP8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 RPN2P04844 631 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 ACADMP11310 421 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 JUPP14923 745 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 CAPN3P20807 821 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 IGFALSP35858 605 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 PNLIPRP1P54315 467 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 IRF8Q02556 426 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 CHIT1Q13231 466 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 RCAN2Q14206 197 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 INPP5AQ14642 412 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 RCN1Q15293 331 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 CCDC6Q16204 474 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 CPSF6Q16630 551 aaKnown RBP eCLIP8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 PIGGQ5H8A4 983 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 COQ5Q5HYK3 327 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 LIPJQ5W064 366 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 PRMT9Q6P2P2 845 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 FAM83HQ6ZRV2 1179 aaPredicted RBP8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 C11orf96Q7Z7L8 435 aa8.89□□□□□ -0.99
SMARCC1-208ENST00000492896 ZFAND4Q86XD8 727 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms