RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 CXCR5P32302 372 aa16.01■□□□□ 0.15
PDLIM2-217ENST00000491330 CASRP41180 1078 aa16.01■□□□□ 0.15
PDLIM2-217ENST00000491330 MAGEA6P43360 314 aa16.01■□□□□ 0.15
PDLIM2-217ENST00000491330 FNTAP49354 379 aa16.01■□□□□ 0.15
PDLIM2-217ENST00000491330 ABRQ12979 859 aa16.01■□□□□ 0.15
PDLIM2-217ENST00000491330 THOC5Q13769 683 aaKnown RBP16.01■□□□□ 0.15
PDLIM2-217ENST00000491330 ZNF658BQ4V348 819 aaPredicted RBP16.01■□□□□ 0.15
PDLIM2-217ENST00000491330 PLEKHS1Q5SXH7 462 aa16.01■□□□□ 0.15
PDLIM2-217ENST00000491330 ASB18Q6ZVZ8 466 aa16.01■□□□□ 0.15
PDLIM2-217ENST00000491330 APLFQ8IW19 511 aaPredicted RBP16.01■□□□□ 0.15
PDLIM2-217ENST00000491330 SYTL1Q8IYJ3 562 aa16.01■□□□□ 0.15
PDLIM2-217ENST00000491330 PRELID2Q8N945 189 aa16.01■□□□□ 0.15
PDLIM2-217ENST00000491330 OR1L3Q8NH93 324 aa16.01■□□□□ 0.15
PDLIM2-217ENST00000491330 VPS50Q96JG6 964 aa16.01■□□□□ 0.15
PDLIM2-217ENST00000491330 CHST8Q9H2A9 424 aa16.01■□□□□ 0.15
PDLIM2-217ENST00000491330 NDOR1Q9UHB4 597 aa16.01■□□□□ 0.15
PDLIM2-217ENST00000491330 SNX12Q9UMY4 172 aa16.01■□□□□ 0.15
PDLIM2-217ENST00000491330 PLCL2Q9UPR0 1127 aa16.01■□□□□ 0.15
PDLIM2-217ENST00000491330 BHMG1C9JSJ3 638 aaPredicted RBP16■□□□□ 0.15
PDLIM2-217ENST00000491330 PEX12O00623 359 aa16■□□□□ 0.15
PDLIM2-217ENST00000491330 TERTO14746 1132 aaKnown RBP16■□□□□ 0.15
PDLIM2-217ENST00000491330 ZNF749O43361 778 aa16■□□□□ 0.15
PDLIM2-217ENST00000491330 KRT14P02533 472 aa16■□□□□ 0.15
PDLIM2-217ENST00000491330 CHRM3P20309 590 aa16■□□□□ 0.15
PDLIM2-217ENST00000491330 CD9P21926 228 aa16■□□□□ 0.15
PDLIM2-217ENST00000491330 RPS3P23396 243 aaKnown RBP eCLIP16■□□□□ 0.15
PDLIM2-217ENST00000491330 KCNJ1P48048 391 aa16■□□□□ 0.15
PDLIM2-217ENST00000491330 ARSFP54793 590 aa16■□□□□ 0.15
PDLIM2-217ENST00000491330 EIF3BP55884 814 aaKnown RBP16■□□□□ 0.15
PDLIM2-217ENST00000491330 DCDP81605 110 aaKnown RBP16■□□□□ 0.15
PDLIM2-217ENST00000491330 GPS1Q13098 491 aa16■□□□□ 0.15
PDLIM2-217ENST00000491330 GPS2Q13227 327 aa16■□□□□ 0.15
PDLIM2-217ENST00000491330 SF1Q15637 639 aaKnown RBP16■□□□□ 0.15
PDLIM2-217ENST00000491330 TTLL9Q3SXZ7 439 aa16■□□□□ 0.15
PDLIM2-217ENST00000491330 ATP1A1-AS1Q5TC04 95 aa16■□□□□ 0.15
PDLIM2-217ENST00000491330 PRUNE1Q86TP1 453 aa16■□□□□ 0.15
PDLIM2-217ENST00000491330 PROKR1Q8TCW9 393 aa16■□□□□ 0.15
PDLIM2-217ENST00000491330 ZNF778Q96MU6 729 aa16■□□□□ 0.15
PDLIM2-217ENST00000491330 RUNDC3BQ96NL0 473 aa16■□□□□ 0.15
PDLIM2-217ENST00000491330 OR2A14Q96R47 310 aa16■□□□□ 0.15
PDLIM2-217ENST00000491330 OSBPL9Q96SU4 736 aa16■□□□□ 0.15
PDLIM2-217ENST00000491330 KLHL25Q9H0H3 589 aa16■□□□□ 0.15
PDLIM2-217ENST00000491330 KCNF1Q9H3M0 494 aa16■□□□□ 0.15
PDLIM2-217ENST00000491330 XAB2Q9HCS7 855 aaKnown RBP16■□□□□ 0.15
PDLIM2-217ENST00000491330 UTP6Q9NYH9 597 aaKnown RBP16■□□□□ 0.15
PDLIM2-217ENST00000491330 COL6A6A6NMZ7 2263 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 SDR42E2A6NKP2 422 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 ZNF839A8K0R7 811 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 ZSCAN9O15535 394 aaPredicted RBP15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 GPC4O75487 556 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 ESR1P03372 595 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 MLNP12872 115 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 PVRP15151 417 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 MGAT1P26572 445 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 AOAHP28039 575 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 PGDP52209 483 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 NFKB2Q00653 900 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 TLE1Q04724 770 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 KYNUQ16719 465 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 NAPRTQ6XQN6 538 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 CDHR3Q6ZTQ4 885 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 MED25Q71SY5 747 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 ZNF534Q76KX8 674 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 ATCAYQ86WG3 371 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 HPS6Q86YV9 775 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 SLC35F6Q8N357 371 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 ENDOVQ8N8Q3 282 aaKnown RBP15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 TMEM102Q8N9M5 508 aaPredicted RBP15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 PPM1MQ96MI6 270 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 SLC25A23Q9BV35 468 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 KIFC1Q9BW19 673 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 FAM114A2Q9NRY5 505 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 TREX1Q9NSU2 369 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 IFT80Q9P2H3 777 aaPredicted RBP15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 RNF14Q9UBS8 474 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 TCFL5Q9UL49 500 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 SOX13Q9UN79 622 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 PCDHGB7Q9Y5F8 929 aa15.99■□□□□ 0.15
PDLIM2-217ENST00000491330 CTAGE9A4FU28 777 aa15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 RASGRF2O14827 1237 aa15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 SLCO2B1O94956 709 aa15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 ITGAXP20702 1163 aa15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 PKLRP30613 574 aa15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 VPS41P49754 854 aa15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 CCL11P51671 97 aa15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 TRIP13Q15645 432 aaPredicted RBP15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 TCTE1Q5JU00 501 aa15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 YOD1Q5VVQ6 348 aaPredicted RBP15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 MLIPQ5VWP3 458 aa15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 CCDC137Q6PK04 289 aaKnown RBP15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 ZNF517Q6ZMY9 492 aaPredicted RBP15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 LDB1Q86U70 411 aaPredicted RBP15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 LMNTD2Q8IXW0 634 aa15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 EFCAB3Q8N7B9 438 aa15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 GLIS1Q8NBF1 620 aa15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 OR2L8Q8NGY9 312 aa15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 CALML6Q8TD86 181 aa15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 ZUFSPQ96AP4 578 aa15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 FER1L6-AS2Q96M78 137 aa15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 TRIM4Q9C037 500 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms