RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 CHST8Q9H2A9 424 aa30.3■■■□□ 2.44
LDB1-204ENST00000490751 ACTR5Q9H9F9 607 aaPredicted RBP30.3■■■□□ 2.44
LDB1-204ENST00000490751 CIDEBQ9UHD4 219 aa30.3■■■□□ 2.44
LDB1-204ENST00000490751 RORAP35398 523 aa30.29■■■□□ 2.44
LDB1-204ENST00000490751 ITGA1P56199 1179 aa30.29■■■□□ 2.44
LDB1-204ENST00000490751 KIR2DS3Q14952 304 aa30.29■■■□□ 2.44
LDB1-204ENST00000490751 ZIC1Q15915 447 aa30.29■■■□□ 2.44
LDB1-204ENST00000490751 KYNUQ16719 465 aa30.29■■■□□ 2.44
LDB1-204ENST00000490751 TYSND1Q2T9J0 566 aa30.29■■■□□ 2.44
LDB1-204ENST00000490751 CTSL3PQ5NE16 218 aa30.29■■■□□ 2.44
LDB1-204ENST00000490751 C9orf43Q8TAL5 461 aaPredicted RBP30.29■■■□□ 2.44
LDB1-204ENST00000490751 TCTN2Q96GX1 697 aa30.29■■■□□ 2.44
LDB1-204ENST00000490751 KCNF1Q9H3M0 494 aa30.29■■■□□ 2.44
LDB1-204ENST00000490751 NEU2Q9Y3R4 380 aa30.29■■■□□ 2.44
LDB1-204ENST00000490751 SPTA1P02549 2419 aa30.28■■■□□ 2.44
LDB1-204ENST00000490751 E7EQ34 232 aa30.28■■■□□ 2.44
LDB1-204ENST00000490751 GRB7Q14451 532 aa30.28■■■□□ 2.44
LDB1-204ENST00000490751 SLC5A12Q1EHB4 618 aa30.28■■■□□ 2.44
LDB1-204ENST00000490751 DEFB110Q30KQ9 67 aa30.28■■■□□ 2.44
LDB1-204ENST00000490751 RNF187Q5TA31 235 aaPredicted RBP30.28■■■□□ 2.44
LDB1-204ENST00000490751 ARMC3Q5W041 872 aa30.28■■■□□ 2.44
LDB1-204ENST00000490751 OTOAQ7RTW8 1153 aa30.28■■■□□ 2.44
LDB1-204ENST00000490751 GSDMBQ8TAX9 411 aa30.28■■■□□ 2.44
LDB1-204ENST00000490751 LPGAT1Q92604 370 aa30.28■■■□□ 2.44
LDB1-204ENST00000490751 N4BP2L2Q92802 583 aaPredicted RBP30.28■■■□□ 2.44
LDB1-204ENST00000490751 TRIM56Q9BRZ2 755 aaKnown RBP30.28■■■□□ 2.44
LDB1-204ENST00000490751 MENTQ9BUN1 341 aa30.28■■■□□ 2.44
LDB1-204ENST00000490751 SLC7A5P2Q9GIP4 190 aa30.28■■■□□ 2.44
LDB1-204ENST00000490751 PCMTD2Q9NV79 361 aa30.28■■■□□ 2.44
LDB1-204ENST00000490751 SAMD15Q9P1V8 674 aa30.28■■■□□ 2.44
LDB1-204ENST00000490751 FARSAQ9Y285 508 aaKnown RBP30.28■■■□□ 2.44
LDB1-204ENST00000490751 KPNA5O15131 536 aa30.27■■■□□ 2.44
LDB1-204ENST00000490751 PHF2O75151 1096 aa30.27■■■□□ 2.44
LDB1-204ENST00000490751 MLNP12872 115 aa30.27■■■□□ 2.44
LDB1-204ENST00000490751 PAMP19021 973 aa30.27■■■□□ 2.44
LDB1-204ENST00000490751 FMO4P31512 558 aa30.27■■■□□ 2.44
LDB1-204ENST00000490751 IZUMO3Q5VZ72 239 aa30.27■■■□□ 2.44
LDB1-204ENST00000490751 LCN10Q6JVE6 187 aa30.27■■■□□ 2.44
LDB1-204ENST00000490751 SYVN1Q86TM6 617 aa30.27■■■□□ 2.44
LDB1-204ENST00000490751 LINC01555Q8NAE3 123 aa30.27■■■□□ 2.44
LDB1-204ENST00000490751 ACTRT1Q8TDG2 376 aa30.27■■■□□ 2.44
LDB1-204ENST00000490751 SEC14L1Q92503 715 aa30.27■■■□□ 2.44
LDB1-204ENST00000490751 BIRC8Q96P09 236 aa30.27■■■□□ 2.44
LDB1-204ENST00000490751 IL17FQ96PD4 163 aa30.27■■■□□ 2.44
LDB1-204ENST00000490751 CHRNA10Q9GZZ6 450 aa30.27■■■□□ 2.44
LDB1-204ENST00000490751 TRMT1Q9NXH9 659 aaKnown RBP30.27■■■□□ 2.44
LDB1-204ENST00000490751 GOLGA8MH3BSY2 632 aa30.26■■■□□ 2.43
LDB1-204ENST00000490751 PYCARD-AS1I3L0S3 204 aa30.26■■■□□ 2.43
LDB1-204ENST00000490751 PFDN6O15212 129 aa30.26■■■□□ 2.43
LDB1-204ENST00000490751 OGNP20774 298 aaKnown RBP30.26■■■□□ 2.43
LDB1-204ENST00000490751 PTRH1Q86Y79 214 aaKnown RBP30.26■■■□□ 2.43
LDB1-204ENST00000490751 SYTL1Q8IYJ3 562 aa30.26■■■□□ 2.43
LDB1-204ENST00000490751 GPR135Q8IZ08 494 aa30.26■■■□□ 2.43
LDB1-204ENST00000490751 LMNTD1Q8N9Z9 388 aa30.26■■■□□ 2.43
LDB1-204ENST00000490751 MCUQ8NE86 351 aa30.26■■■□□ 2.43
LDB1-204ENST00000490751 SKA2Q8WVK7 121 aaPredicted RBP30.26■■■□□ 2.43
LDB1-204ENST00000490751 ABHD17AQ96GS6 310 aa30.26■■■□□ 2.43
LDB1-204ENST00000490751 TCF12Q99081 682 aa30.26■■■□□ 2.43
LDB1-204ENST00000490751 XAB2Q9HCS7 855 aaKnown RBP30.26■■■□□ 2.43
LDB1-204ENST00000490751 ZNF71Q9NQZ8 489 aaPredicted RBP30.26■■■□□ 2.43
LDB1-204ENST00000490751 MAN2B2Q9Y2E5 1009 aa30.26■■■□□ 2.43
LDB1-204ENST00000490751 ZNF749O43361 778 aa30.25■■■□□ 2.43
LDB1-204ENST00000490751 SUV39H1O43463 412 aa30.25■■■□□ 2.43
LDB1-204ENST00000490751 HCRTR1O43613 425 aa30.25■■■□□ 2.43
LDB1-204ENST00000490751 KIF5CO60282 957 aa30.25■■■□□ 2.43
LDB1-204ENST00000490751 NIPSNAP2O75323 286 aa30.25■■■□□ 2.43
LDB1-204ENST00000490751 CD9P21926 228 aa30.25■■■□□ 2.43
LDB1-204ENST00000490751 GABRA4P48169 554 aa30.25■■■□□ 2.43
LDB1-204ENST00000490751 UGT8Q16880 541 aa30.25■■■□□ 2.43
LDB1-204ENST00000490751 PTCHD3Q3KNS1 767 aa30.25■■■□□ 2.43
LDB1-204ENST00000490751 ATG14Q6ZNE5 492 aa30.25■■■□□ 2.43
LDB1-204ENST00000490751 TAX1BP1Q86VP1 789 aa30.25■■■□□ 2.43
LDB1-204ENST00000490751 FAM20CQ8IXL6 584 aa30.25■■■□□ 2.43
LDB1-204ENST00000490751 C2orf73Q8N5S3 287 aaPredicted RBP30.25■■■□□ 2.43
LDB1-204ENST00000490751 ZNF669Q96BR6 464 aaPredicted RBP30.25■■■□□ 2.43
LDB1-204ENST00000490751 SERPINB12Q96P63 405 aa30.25■■■□□ 2.43
LDB1-204ENST00000490751 IL1RAPL1Q9NZN1 696 aa30.25■■■□□ 2.43
LDB1-204ENST00000490751 SNX12Q9UMY4 172 aa30.25■■■□□ 2.43
LDB1-204ENST00000490751 CRYL1Q9Y2S2 319 aa30.25■■■□□ 2.43
LDB1-204ENST00000490751 NFS1Q9Y697 457 aa30.25■■■□□ 2.43
LDB1-204ENST00000490751 GOLGA6L10A0A0M3HER8 536 aa30.24■■■□□ 2.43
LDB1-204ENST00000490751 FAM237BA0A1B0GVD1 139 aa30.24■■■□□ 2.43
LDB1-204ENST00000490751 IL10RAQ13651 578 aa30.24■■■□□ 2.43
LDB1-204ENST00000490751 DHX34Q14147 1143 aaKnown RBP30.24■■■□□ 2.43
LDB1-204ENST00000490751 ANKRD20A4Q4UJ75 823 aa30.24■■■□□ 2.43
LDB1-204ENST00000490751 NEPROQ6NW34 567 aa30.24■■■□□ 2.43
LDB1-204ENST00000490751 TTC23LQ6PF05 361 aa30.24■■■□□ 2.43
LDB1-204ENST00000490751 ENDOVQ8N8Q3 282 aaKnown RBP30.24■■■□□ 2.43
LDB1-204ENST00000490751 OR2L8Q8NGY9 312 aa30.24■■■□□ 2.43
LDB1-204ENST00000490751 GRK7Q8WTQ7 553 aa30.24■■■□□ 2.43
LDB1-204ENST00000490751 SLC39A10Q9ULF5 831 aa30.24■■■□□ 2.43
LDB1-204ENST00000490751 RUVBL2Q9Y230 463 aaKnown RBP30.24■■■□□ 2.43
LDB1-204ENST00000490751 SDR42E2A6NKP2 422 aa30.23■■■□□ 2.43
LDB1-204ENST00000490751 H3BMM5 538 aa30.23■■■□□ 2.43
LDB1-204ENST00000490751 RASGRF2O14827 1237 aa30.23■■■□□ 2.43
LDB1-204ENST00000490751 ZNF185O15231 689 aa30.23■■■□□ 2.43
LDB1-204ENST00000490751 OR2B3O76000 313 aa30.23■■■□□ 2.43
LDB1-204ENST00000490751 ESR1P03372 595 aa30.23■■■□□ 2.43
LDB1-204ENST00000490751 HBQ1P09105 142 aa30.23■■■□□ 2.43
LDB1-204ENST00000490751 RAB40ALP0C0E4 278 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms