RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 AP1M2Q9Y6Q5 423 aa10.05□□□□□ -0.8
TTC28-207ENST00000490475 SPTBN1Q01082 2364 aaKnown RBP10.05□□□□□ -0.8
TTC28-207ENST00000490475 BSNQ9UPA5 3926 aa10.05□□□□□ -0.8
TTC28-207ENST00000490475 SPTBP11277 2137 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 E7EQ34 232 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 SGTAO43765 313 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 DPM1O60762 260 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 GOT2P00505 430 aaKnown RBP10.04□□□□□ -0.8
TTC28-207ENST00000490475 FURINP09958 794 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 IVDP26440 423 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 NMBRP28336 390 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 PRDX3P30048 256 aaKnown RBP10.04□□□□□ -0.8
TTC28-207ENST00000490475 SHMT2P34897 504 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 ITGA1P56199 1179 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 SARNPP82979 210 aaKnown RBP10.04□□□□□ -0.8
TTC28-207ENST00000490475 DR1Q01658 176 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 GPR19Q15760 415 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 NLRP9Q7RTR0 991 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 AMIGO1Q86WK6 493 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 RAB43Q86YS6 212 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 MPP5Q8N3R9 675 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 NAT8LQ8N9F0 302 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 GALNT11Q8NCW6 608 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 MCUQ8NE86 351 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 PPHLN1Q8NEY8 458 aaKnown RBP10.04□□□□□ -0.8
TTC28-207ENST00000490475 SPDYE1Q8NFV5 336 aaPredicted RBP10.04□□□□□ -0.8
TTC28-207ENST00000490475 TFGQ92734 400 aaPredicted RBP10.04□□□□□ -0.8
TTC28-207ENST00000490475 TCTN2Q96GX1 697 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 KRT12Q99456 494 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 TRIM56Q9BRZ2 755 aaKnown RBP10.04□□□□□ -0.8
TTC28-207ENST00000490475 TSSK1BQ9BXA7 367 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 IL22Q9GZX6 179 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 OR52A5Q9H2C5 316 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 ACTR5Q9H9F9 607 aaPredicted RBP10.04□□□□□ -0.8
TTC28-207ENST00000490475 MLXIPLQ9NP71 852 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 SYBUQ9NX95 663 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 FAM53CQ9NYF3 392 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 FAM8A1Q9UBU6 413 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 ASIC3Q9UHC3 531 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 RIMKLBQ9ULI2 386 aa10.04□□□□□ -0.8
TTC28-207ENST00000490475 CLEC18AA5D8T8 446 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 SLC9B1P1A6NJY1 282 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 TTLL8A6PVC2 850 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 TMEM150CB9EJG8 249 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 AP3B1O00203 1094 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 TTI1O43156 1089 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 RPN2P04844 631 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 GP1BBP13224 206 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 ACVR1Q04771 509 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 GPS2Q13227 327 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 PTK6Q13882 451 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 BOP1Q14137 746 aaKnown RBP10.03□□□□□ -0.8
TTC28-207ENST00000490475 DBN1Q16643 649 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 PLEKHS1Q5SXH7 462 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 RNASEH2BQ5TBB1 312 aaKnown RBP10.03□□□□□ -0.8
TTC28-207ENST00000490475 DUS1LQ6P1R4 473 aaKnown RBP10.03□□□□□ -0.8
TTC28-207ENST00000490475 CLEC18BQ6UXF7 455 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 PACS1Q6VY07 963 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 CERS6Q6ZMG9 384 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 PPIL6Q8IXY8 311 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 TBC1D21Q8IYX1 336 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 KRT222Q8N1A0 295 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 AGGF1Q8N302 714 aaeCLIP10.03□□□□□ -0.8
TTC28-207ENST00000490475 CLDN19Q8N6F1 224 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 CLEC18CQ8NCF0 446 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 SPATA4Q8NEY3 305 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 OR4L1Q8NH43 312 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 SLCO2A1Q92959 643 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 PEX13Q92968 403 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 NACC2Q96BF6 587 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 MFSD3Q96ES6 412 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 TRIM51Q9BSJ1 452 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 KIFC1Q9BW19 673 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 CHST8Q9H2A9 424 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 TREX1Q9NSU2 369 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 OR6C2Q9NZP2 312 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 TCFL5Q9UL49 500 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 SRPK3Q9UPE1 567 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 MRFAP1Q9Y605 127 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 PRSS21Q9Y6M0 314 aa10.03□□□□□ -0.8
TTC28-207ENST00000490475 SPTAN1Q13813 2472 aaKnown RBP10.02□□□□□ -0.8
TTC28-207ENST00000490475 MED13Q9UHV7 2174 aa10.02□□□□□ -0.8
TTC28-207ENST00000490475 USP9YO00507 2555 aaPredicted RBP10.02□□□□□ -0.81
TTC28-207ENST00000490475 SDR42E2A6NKP2 422 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 GOLGA8KD6RF30 607 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 GOLGA8TH3BQL2 631 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 CCDC188H7C350 402 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 BTN3A1O00481 513 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 DNALI1O14645 258 aaPredicted RBP10.02□□□□□ -0.81
TTC28-207ENST00000490475 OR1I1O60431 355 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 ALPPP05187 535 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 OR56A5P0C7T3 313 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 MLNP12872 115 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 FOXN2P32314 431 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 RORAP35398 523 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 PRAMEP78395 509 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 SRSF1Q07955 248 aaKnown RBP eCLIP10.02□□□□□ -0.81
TTC28-207ENST00000490475 SEMA3AQ14563 771 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 ESPL1Q14674 2120 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 IGFBP7Q16270 282 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms