RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 PIGNO95427 931 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 UMODP07911 640 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 HSPA8P11142 646 aaKnown RBP3.61□□□□□ -1.83
CD46-216ENST00000490278 CYP11B2P19099 503 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 PTAFRP25105 342 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 HSPA4P34932 840 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 TIMP3P35625 211 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 CHRNA7P36544 502 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 MNDAP41218 407 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 CCR10P46092 362 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 LHX1P48742 406 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 LINC01547P58512 204 aaPredicted RBP3.61□□□□□ -1.83
CD46-216ENST00000490278 MAT1AQ00266 395 aaKnown RBP3.61□□□□□ -1.83
CD46-216ENST00000490278 HYAL4Q2M3T9 481 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 DCAF10Q5QP82 559 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 C11orf63Q6NUN7 778 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 MARK2Q7KZI7 788 aaKnown RBP3.61□□□□□ -1.83
CD46-216ENST00000490278 NUP54Q7Z3B4 507 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 ARHGAP22Q7Z5H3 698 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 TRPT1Q86TN4 253 aaKnown RBP3.61□□□□□ -1.83
CD46-216ENST00000490278 CUZD1Q86UP6 607 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 TMEM139Q8IV31 216 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 SPSB1Q96BD6 273 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 NSL1Q96IY1 281 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 ZMAT2Q96NC0 199 aaKnown RBP3.61□□□□□ -1.83
CD46-216ENST00000490278 RAB3IPQ96QF0 476 aaPredicted RBP3.61□□□□□ -1.83
CD46-216ENST00000490278 FEVQ99581 238 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 CPNE1Q99829 537 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 KRTAP1-5Q9BYS1 174 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 A4GALTQ9NPC4 353 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 PFDN4Q9NQP4 134 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 GKN1Q9NS71 199 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 ADPRHL2Q9NX46 363 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 SPHK1Q9NYA1 384 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.61□□□□□ -1.83
CD46-216ENST00000490278 ANAPC5Q9UJX4 755 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 LOC101059948A0A1B0GTJ6 334 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 SMIM1B2RUZ4 78 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 FAM72CH0Y354 149 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 DNM1LO00429 736 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 PLOD2O00469 737 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 SLC22A2O15244 555 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 CLIC2O15247 247 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 PRKRAO75569 313 aaKnown RBP3.6□□□□□ -1.83
CD46-216ENST00000490278 SAGP10523 405 aaPredicted RBP3.6□□□□□ -1.83
CD46-216ENST00000490278 HAPLN1P10915 354 aaPredicted RBP3.6□□□□□ -1.83
CD46-216ENST00000490278 FDPSP14324 419 aaKnown RBP3.6□□□□□ -1.83
CD46-216ENST00000490278 CD22P20273 847 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 EFNA1P20827 205 aaPredicted RBP3.6□□□□□ -1.83
CD46-216ENST00000490278 CA4P22748 312 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 ANOS1P23352 680 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 POLR2LP62875 67 aaKnown RBP3.6□□□□□ -1.83
CD46-216ENST00000490278 PPIGQ13427 754 aaKnown RBP eCLIP3.6□□□□□ -1.838e-12■■□□□ 13
CD46-216ENST00000490278 CUL3Q13618 768 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 TAF13Q15543 124 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 CA9Q16790 459 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 ITPRIPL2Q3MIP1 535 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 PHLDA2Q53GA4 152 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 SPECC1Q5M775 1068 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 FAM72AQ5TYM5 149 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 FAM72DQ6L9T8 149 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 CEACAM20Q6UY09 585 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 RBMS3Q6XE24 437 aaKnown RBP3.6□□□□□ -1.83
CD46-216ENST00000490278 MEX3BQ6ZN04 569 aaKnown RBP3.6□□□□□ -1.83
CD46-216ENST00000490278 ERN2Q76MJ5 926 aaKnown RBP3.6□□□□□ -1.83
CD46-216ENST00000490278 ADCK2Q7Z695 626 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 ISCA2Q86U28 154 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 FAM72BQ86X60 149 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 VSIG1Q86XK7 387 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 ZNF611Q8N823 705 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 THAP8Q8NA92 274 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 OR10V1Q8NGI7 309 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 OLIG1Q8TAK6 271 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 EXT2Q93063 718 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 SIPA1Q96FS4 1042 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 OTUB1Q96FW1 271 aaPredicted RBP3.6□□□□□ -1.83
CD46-216ENST00000490278 HES6Q96HZ4 224 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 RAD9AQ99638 391 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 EDEM3Q9BZQ6 932 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 FAM129AQ9BZQ8 928 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 LAT2Q9GZY6 243 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 MIS12Q9H081 205 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 ZCCHC17Q9NP64 241 aaKnown RBP3.6□□□□□ -1.83
CD46-216ENST00000490278 TBC1D7Q9P0N9 293 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 ZNF624Q9P2J8 865 aaPredicted RBP3.6□□□□□ -1.83
CD46-216ENST00000490278 CACNG4Q9UBN1 327 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 DAPK2Q9UIK4 370 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 TRIM17Q9Y577 477 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 LIPGQ9Y5X9 500 aa3.6□□□□□ -1.83
CD46-216ENST00000490278 IGLV9-49A0A0B4J1Y8 123 aa3.59□□□□□ -1.83
CD46-216ENST00000490278 A0A0G2JLW4 131 aa3.59□□□□□ -1.83
CD46-216ENST00000490278 PMS2P5A8MQ11 134 aa3.59□□□□□ -1.83
CD46-216ENST00000490278 PRR23D1E9PI22 279 aaPredicted RBP3.59□□□□□ -1.83
CD46-216ENST00000490278 CCDC188H7C350 402 aa3.59□□□□□ -1.83
CD46-216ENST00000490278 TBCAO75347 108 aaKnown RBP3.59□□□□□ -1.83
CD46-216ENST00000490278 ACSL3O95573 720 aa3.59□□□□□ -1.83
CD46-216ENST00000490278 HSPA4LO95757 839 aa3.59□□□□□ -1.83
CD46-216ENST00000490278 PRR23D2P0DMB1 279 aaPredicted RBP3.59□□□□□ -1.83
CD46-216ENST00000490278 JAK1P23458 1154 aa3.59□□□□□ -1.83
CD46-216ENST00000490278 AZGP1P25311 298 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms