RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 EME2A4GXA9 379 aaPredicted RBP3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 MAGEA13PA6NCF6 341 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 OR6C68A6NDL8 312 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 HSPB2A8KAH6 182 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 LACTBL1A8MY62 500 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 FAM25EA8MYX2 175 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 SGK1O00141 431 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 TLR4O00206 839 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 CXCL11O14625 94 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 SMAD6O43541 496 aaKnown RBP3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 TLX3O43711 291 aaPredicted RBP3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 LANCL1O43813 399 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 CNTN5O94779 1100 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 GAS8-AS1O95177 125 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 EPN2O95208 641 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 SBK2P0C263 348 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 SLC2A4P14672 509 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 PRLRP16471 622 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 DDX5P17844 614 aaKnown RBP3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 GSTM2P28161 218 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 NDUFS1P28331 727 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 ADSSP30520 456 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 FRKP42685 505 aaPredicted RBP3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 CDKN2AP42771 156 aaKnown RBP3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 SOX2P48431 317 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 TRPC1P48995 793 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 BLKP51451 505 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 CLCNKAP51800 687 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 NAGLUP54802 743 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 SNU13P55769 128 aaKnown RBP3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 COG7P83436 770 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 SLC18A2Q05940 514 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 TEFQ10587 303 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 HSPB2Q16082 182 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 INAQ16352 499 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 PRTGQ2VWP7 1150 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 IQCCQ4KMZ1 466 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 HSP90AA5PQ58FG0 334 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 MDH1BQ5I0G3 518 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 RNASEH2BQ5TBB1 312 aaKnown RBP3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 SHEQ5VZ18 495 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 PLA2G4FQ68DD2 849 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 HMBOX1Q6NT76 420 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 CES3Q6UWW8 571 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 IL20RBQ6UXL0 311 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 ZBTB49Q6ZSB9 765 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 ADCK1Q86TW2 530 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 TSPAN33Q86UF1 283 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 RFX6Q8HWS3 928 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 CLYBLQ8N0X4 340 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 EXOC6Q8TAG9 804 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 CCDC110Q8TBZ0 833 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 NSMAFQ92636 917 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 FAM46BQ96A09 425 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 TUBGCP3Q96CW5 907 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 MSI2Q96DH6 328 aaKnown RBP3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 NECTIN4Q96NY8 510 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 PANX3Q96QZ0 392 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 ZNF347Q96SE7 839 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 CARD6Q9BX69 1037 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 RAB33BQ9H082 229 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 CARD9Q9H257 536 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 HIPK2Q9H2X6 1198 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 POLE3Q9NRF9 147 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 HOMER3Q9NSC5 361 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 ATAD3AQ9NVI7 634 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 NMRK1Q9NWW6 199 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 PSD3Q9NYI0 1048 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 AIPL1Q9NZN9 384 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 ICKQ9UPZ9 632 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 EXO1Q9UQ84 846 aaKnown RBP3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 HBS1LQ9Y450 684 aaKnown RBP3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 CLIC4Q9Y696 253 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 METP08581 1390 aa3.11□□□□□ -1.91
DEPDC1-204ENST00000489862 ADGRB3O60242 1522 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 NEXMIFQ5QGS0 1516 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 SPHKAPQ2M3C7 1700 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 NOTCH4Q99466 2003 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 SCAF11Q99590 1463 aaKnown RBP3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 HEG1Q9ULI3 1381 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 LOC100509620A0A075B734 347 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 TRBV5-3A0A0A0MS03 114 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 TMEM272A0A1B0GTI8 110 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 LINC00854A0A1B0GVQ3 168 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 DENND3A2RUS2 1198 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 TTC34A8MYJ7 566 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 F8W810 466 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 MAGEB3O15480 346 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 OGG1O15527 345 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 PLPP2O43688 288 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 KLK8O60259 260 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 OR6B1O95007 311 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 RLN1P04808 185 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 HOXB9P17482 250 aaPredicted RBP3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 MMP8P22894 467 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 MYF6P23409 242 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 AKT2P31751 481 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 WNT5AP41221 380 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 MAGEB1P43366 347 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms