RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, human

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB11FIP3-210	ENST00000487899	IL22	Q9GZX6	179 aa		10.83	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	CHRNA10	Q9GZZ6	450 aa		10.83	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	TDRKH	Q9Y2W6	561 aa	Known RBP	10.83	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	USP9Y	O00507	2555 aa	Predicted RBP	10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899		E7EQ34	232 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	ZNF749	O43361	778 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	TMEM63A	O94886	807 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	TPSB2	P20231	275 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	AOAH	P28039	575 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	MAGEA6	P43360	314 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	TTPA	P49638	278 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	RAB28	P51157	221 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	RPS15	P62841	145 aa	Known RBP	10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	FOXK1	P85037	733 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	PLOD1	Q02809	727 aa	Predicted RBP	10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	HSPA14	Q0VDF9	509 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	TPSAB1	Q15661	275 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	TYSND1	Q2T9J0	566 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	FASTKD1	Q53R41	847 aa	Known RBP	10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	DNAJC21	Q5F1R6	531 aa	Known RBP	10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	AARS2	Q5JTZ9	985 aa	Known RBP	10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	PCID2	Q5JVF3	399 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	CTSL3P	Q5NE16	218 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	TTC27	Q6P3X3	843 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	UNC5D	Q6UXZ4	953 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	DCUN1D3	Q8IWE4	304 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	LRRC8A	Q8IWT6	810 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	FAM20C	Q8IXL6	584 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	PRELID2	Q8N945	189 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	TRIM58	Q8NG06	486 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	THAP4	Q8WY91	577 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	CLIP3	Q96DZ5	547 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	TRIM56	Q9BRZ2	755 aa	Known RBP	10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	CARD6	Q9BX69	1037 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	NLN	Q9BYT8	704 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	MLXIPL	Q9NP71	852 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	CIDEB	Q9UHD4	219 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	POLG2	Q9UHN1	485 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	TCFL5	Q9UL49	500 aa		10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	RUVBL2	Q9Y230	463 aa	Known RBP	10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	FARSA	Q9Y285	508 aa	Known RBP	10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	DRG1	Q9Y295	367 aa	Known RBP	10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	SPTAN1	Q13813	2472 aa	Known RBP	10.82	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	ARGFX	A6NJG6	315 aa		10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	PRMT5	O14744	637 aa	Predicted RBP	10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	CD3EAP	O15446	510 aa	Known RBP	10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	ZSCAN9	O15535	394 aa	Predicted RBP	10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	CNOT3	O75175	753 aa	Known RBP	10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	SLCO2B1	O94956	709 aa		10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	ITGAX	P20702	1163 aa		10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	MAG	P20916	626 aa		10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	RPS3	P23396	243 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	MGAT1	P26572	445 aa		10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	KLRB1	Q12918	225 aa		10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	GBX1	Q14549	363 aa		10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	KIR2DS3	Q14952	304 aa		10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	KYNU	Q16719	465 aa		10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	SLC5A12	Q1EHB4	618 aa		10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	ANKRD22	Q5VYY1	191 aa		10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	PAPD7	Q5XG87	772 aa	Known RBP	10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	RHBDD2	Q6NTF9	364 aa		10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	TMEM151B	Q8IW70	566 aa		10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	MPP5	Q8N3R9	675 aa		10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	LPGAT1	Q92604	370 aa		10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	MFSD3	Q96ES6	412 aa		10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	TCTN2	Q96GX1	697 aa		10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	IL17F	Q96PD4	163 aa		10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	GBP5	Q96PP8	586 aa		10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	KIFC1	Q9BW19	673 aa		10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	MRM3	Q9HC36	420 aa	Known RBP	10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	TTC7A	Q9ULT0	858 aa	Predicted RBP	10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	SNX7	Q9UNH6	387 aa		10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	KLHL20	Q9Y2M5	609 aa		10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	PPP2R2C	Q9Y2T4	447 aa		10.81	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	HIVEP3	Q5T1R4	2406 aa		10.8	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	10.8	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	CLEC18A	A5D8T8	446 aa		10.8	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	RASGRF2	O14827	1237 aa		10.8	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	CEP104	O60308	925 aa		10.8	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	NRP2	O60462	931 aa		10.8	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	KLF7	O75840	302 aa	Predicted RBP	10.8	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	CEACAM4	O75871	244 aa		10.8	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	OR2B3	O76000	313 aa		10.8	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	APOA4	P06727	396 aa		10.8	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	KLK3	P07288	261 aa	Predicted RBP	10.8	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	CBSL	P0DN79	551 aa		10.8	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	CD9	P21926	228 aa		10.8	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	PSMB5	P28074	263 aa		10.8	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	CBS	P35520	551 aa		10.8	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	BDKRB1	P46663	353 aa		10.8	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	VPS41	P49754	854 aa		10.8	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	FOXL2	P58012	376 aa		10.8	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	ATP1A4	Q13733	1029 aa		10.8	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	IGFBP7	Q16270	282 aa		10.8	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	CCSMST1	Q4G0I0	132 aa		10.8	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	KIAA0930	Q6ICG6	404 aa	Predicted RBP	10.8	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	LRRC8B	Q6P9F7	803 aa		10.8	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	CES3	Q6UWW8	571 aa		10.8	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	CLEC18B	Q6UXF7	455 aa		10.8	□□□□□ -0.68
RAB11FIP3-210	ENST00000487899	C4orf22	Q6V702	233 aa		10.8	□□□□□ -0.68

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