RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 C10orf90Q96M02 699 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 ITPAQ9BY32 194 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 GNB4Q9HAV0 340 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 DIAPH3Q9NSV4 1193 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 P4HTMQ9NXG6 502 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 DAPK2Q9UIK4 370 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 TMEM98Q9Y2Y6 226 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 ANKRD61A6NGH8 418 aa3.37□□□□□ -1.87
SMC4-219ENST00000487747 MYO1GB0I1T2 1018 aa3.37□□□□□ -1.87
SMC4-219ENST00000487747 PI4K2BG5E9Z4 385 aa3.37□□□□□ -1.87
SMC4-219ENST00000487747 IGKV3-15P01624 115 aa3.37□□□□□ -1.87
SMC4-219ENST00000487747 CLTBP09497 229 aa3.37□□□□□ -1.87
SMC4-219ENST00000487747 MAPK4P31152 587 aa3.37□□□□□ -1.87
SMC4-219ENST00000487747 GABRA5P31644 462 aa3.37□□□□□ -1.87
SMC4-219ENST00000487747 CDH8P55286 799 aa3.37□□□□□ -1.87
SMC4-219ENST00000487747 MTF1Q14872 753 aa3.37□□□□□ -1.87
SMC4-219ENST00000487747 C20orf194Q5TEA3 1177 aa3.37□□□□□ -1.87
SMC4-219ENST00000487747 SNX30Q5VWJ9 437 aa3.37□□□□□ -1.87
SMC4-219ENST00000487747 CHST9Q7L1S5 443 aa3.37□□□□□ -1.87
SMC4-219ENST00000487747 AACSQ86V21 672 aa3.37□□□□□ -1.87
SMC4-219ENST00000487747 COMMD2Q86X83 199 aa3.37□□□□□ -1.87
SMC4-219ENST00000487747 CFAP206Q8IYR0 622 aa3.37□□□□□ -1.87
SMC4-219ENST00000487747 BTBD10Q9BSF8 475 aa3.37□□□□□ -1.87
SMC4-219ENST00000487747 PITPNM3Q9BZ71 974 aa3.37□□□□□ -1.87
SMC4-219ENST00000487747 OR2B2Q9GZK3 357 aa3.37□□□□□ -1.87
SMC4-219ENST00000487747 PANK3Q9H999 370 aa3.37□□□□□ -1.87
SMC4-219ENST00000487747 CHMP1AQ9HD42 196 aaPredicted RBP3.37□□□□□ -1.87
SMC4-219ENST00000487747 FGF21Q9NSA1 209 aa3.37□□□□□ -1.87
SMC4-219ENST00000487747 GRID1Q9ULK0 1009 aa3.37□□□□□ -1.87
SMC4-219ENST00000487747 OR10H2O60403 315 aa3.36□□□□□ -1.87
SMC4-219ENST00000487747 LAMP2P13473 410 aa3.36□□□□□ -1.87
SMC4-219ENST00000487747 PRAMEP78395 509 aa3.36□□□□□ -1.87
SMC4-219ENST00000487747 KRT33BQ14525 404 aa3.36□□□□□ -1.87
SMC4-219ENST00000487747 HERC3Q15034 1050 aa3.36□□□□□ -1.87
SMC4-219ENST00000487747 RNF212Q495C1 297 aa3.36□□□□□ -1.87
SMC4-219ENST00000487747 FIGLAQ6QHK4 219 aa3.36□□□□□ -1.87
SMC4-219ENST00000487747 ADGRA1Q86SQ6 560 aa3.36□□□□□ -1.87
SMC4-219ENST00000487747 NPEPL1Q8NDH3 523 aa3.36□□□□□ -1.87
SMC4-219ENST00000487747 CEP295NLQ96MC4 621 aa3.36□□□□□ -1.87
SMC4-219ENST00000487747 C7orf26Q96N11 449 aa3.36□□□□□ -1.87
SMC4-219ENST00000487747 THAP2Q9H0W7 228 aa3.36□□□□□ -1.87
SMC4-219ENST00000487747 CPVLQ9H3G5 476 aa3.36□□□□□ -1.87
SMC4-219ENST00000487747 LARSQ9P2J5 1176 aaKnown RBP3.36□□□□□ -1.87
SMC4-219ENST00000487747 B3GAT1Q9P2W7 334 aa3.36□□□□□ -1.87
SMC4-219ENST00000487747 ORC3Q9UBD5 711 aaPredicted RBP3.36□□□□□ -1.87
SMC4-219ENST00000487747 LAS1LQ9Y4W2 734 aaKnown RBP3.36□□□□□ -1.87
SMC4-219ENST00000487747 KLF2Q9Y5W3 355 aaPredicted RBP3.36□□□□□ -1.87
SMC4-219ENST00000487747 SEC24AO95486 1093 aa3.35□□□□□ -1.87
SMC4-219ENST00000487747 RB1P06400 928 aa3.35□□□□□ -1.87
SMC4-219ENST00000487747 SLC6A6P31641 620 aa3.35□□□□□ -1.87
SMC4-219ENST00000487747 CSNK2BP67870 215 aa3.35□□□□□ -1.87
SMC4-219ENST00000487747 CYCSP99999 105 aaKnown RBP3.35□□□□□ -1.87
SMC4-219ENST00000487747 ADIPOR2Q86V24 386 aa3.35□□□□□ -1.87
SMC4-219ENST00000487747 SLC47A2Q86VL8 602 aa3.35□□□□□ -1.87
SMC4-219ENST00000487747 MCEMP1Q8IX19 187 aa3.35□□□□□ -1.87
SMC4-219ENST00000487747 CDK20Q8IZL9 346 aa3.35□□□□□ -1.87
SMC4-219ENST00000487747 PPFIBP2Q8ND30 876 aa3.35□□□□□ -1.87
SMC4-219ENST00000487747 OR52N5Q8NH56 324 aa3.35□□□□□ -1.87
SMC4-219ENST00000487747 OR1L3Q8NH93 324 aa3.35□□□□□ -1.87
SMC4-219ENST00000487747 ATP8B4Q8TF62 1192 aa3.35□□□□□ -1.87
SMC4-219ENST00000487747 ZNF577Q9BSK1 485 aa3.35□□□□□ -1.87
SMC4-219ENST00000487747 LMF2Q9BU23 707 aaKnown RBP3.35□□□□□ -1.87
SMC4-219ENST00000487747 FNDC11Q9BVV2 318 aa3.35□□□□□ -1.87
SMC4-219ENST00000487747 SLC26A6Q9BXS9 759 aa3.35□□□□□ -1.87
SMC4-219ENST00000487747 PUS3Q9BZE2 481 aaKnown RBP3.35□□□□□ -1.87
SMC4-219ENST00000487747 TNNQ9UQP3 1299 aa3.35□□□□□ -1.87
SMC4-219ENST00000487747 ACOD1A6NK06 481 aa3.34□□□□□ -1.87
SMC4-219ENST00000487747 KLLNB2CW77 178 aa3.34□□□□□ -1.87
SMC4-219ENST00000487747 RNASEH1O60930 286 aaKnown RBP3.34□□□□□ -1.87
SMC4-219ENST00000487747 ZWINTO95229 277 aa3.34□□□□□ -1.87
SMC4-219ENST00000487747 FOLR2P14207 255 aa3.34□□□□□ -1.87
SMC4-219ENST00000487747 LHCGRP22888 699 aa3.34□□□□□ -1.87
SMC4-219ENST00000487747 MAZP56270 477 aaKnown RBP3.34□□□□□ -1.87
SMC4-219ENST00000487747 TMEM50BP56557 158 aa3.34□□□□□ -1.87
SMC4-219ENST00000487747 TMF1P82094 1093 aa3.34□□□□□ -1.87
SMC4-219ENST00000487747 ZFP36L1Q07352 338 aaKnown RBP3.34□□□□□ -1.87
SMC4-219ENST00000487747 TAF10Q12962 218 aa3.34□□□□□ -1.87
SMC4-219ENST00000487747 TNIP1Q15025 636 aa3.34□□□□□ -1.87
SMC4-219ENST00000487747 TMEM154Q6P9G4 183 aa3.34□□□□□ -1.87
SMC4-219ENST00000487747 CATSPERDQ86XM0 798 aa3.34□□□□□ -1.87
SMC4-219ENST00000487747 NUP37Q8NFH4 326 aa3.34□□□□□ -1.87
SMC4-219ENST00000487747 GPRC5AQ8NFJ5 357 aa3.34□□□□□ -1.87
SMC4-219ENST00000487747 OR6S1Q8NH40 331 aa3.34□□□□□ -1.87
SMC4-219ENST00000487747 USP6NLQ92738 828 aa3.34□□□□□ -1.87
SMC4-219ENST00000487747 LRRC59Q96AG4 307 aaKnown RBP3.34□□□□□ -1.87
SMC4-219ENST00000487747 PDLIM5Q96HC4 596 aaKnown RBP3.34□□□□□ -1.87
SMC4-219ENST00000487747 PGAM5Q96HS1 289 aa3.34□□□□□ -1.87
SMC4-219ENST00000487747 URM1Q9BTM9 101 aaKnown RBP3.34□□□□□ -1.87
SMC4-219ENST00000487747 RPP25Q9BUL9 199 aaKnown RBP3.34□□□□□ -1.87
SMC4-219ENST00000487747 IRAK4Q9NWZ3 460 aa3.34□□□□□ -1.87
SMC4-219ENST00000487747 TEX10Q9NXF1 929 aaPredicted RBP3.34□□□□□ -1.87
SMC4-219ENST00000487747 OR6C2Q9NZP2 312 aa3.34□□□□□ -1.87
SMC4-219ENST00000487747 PGAP2Q9UHJ9 254 aa3.34□□□□□ -1.87
SMC4-219ENST00000487747 HACL1Q9UJ83 578 aa3.34□□□□□ -1.87
SMC4-219ENST00000487747 LNP1A1A4G5 178 aa3.33□□□□□ -1.88
SMC4-219ENST00000487747 MITFO75030 526 aaPredicted RBP3.33□□□□□ -1.88
SMC4-219ENST00000487747 AVILO75366 819 aa3.33□□□□□ -1.88
SMC4-219ENST00000487747 HSPA8P11142 646 aaKnown RBP3.33□□□□□ -1.88
SMC4-219ENST00000487747 GARSP41250 739 aaKnown RBP3.33□□□□□ -1.88
SMC4-219ENST00000487747 RPL21P46778 160 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms