RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 CAPN1P07384 714 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 CD63P08962 238 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 TPBGLP0DKB5 382 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 NPY2RP49146 381 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 TTPAP49638 278 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 RAB28P51157 221 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 RRADP55042 308 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 DCDP81605 110 aaKnown RBP12.01□□□□□ -0.49
SREBF1-215ENST00000487401 SEMA3AQ14563 771 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 DEFB110Q30KQ9 67 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 FAM69BQ5VUD6 431 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 TLDC1Q6P9B6 456 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 TTC23LQ6PF05 361 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 MED25Q71SY5 747 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 LDB1Q86U70 411 aaPredicted RBP12.01□□□□□ -0.49
SREBF1-215ENST00000487401 SLC22A15Q8IZD6 547 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 ZBTB2Q8N680 514 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 OTUD6BQ8N6M0 293 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 ZNF655Q8N720 491 aaPredicted RBP12.01□□□□□ -0.49
SREBF1-215ENST00000487401 EFCAB3Q8N7B9 438 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 GLIS1Q8NBF1 620 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 MIB2Q96AX9 1013 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 SLC22A18Q96BI1 424 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 LZTFL1Q9NQ48 299 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 TXLNGQ9NUQ3 528 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.01□□□□□ -0.49
SREBF1-215ENST00000487401 IFT80Q9P2H3 777 aaPredicted RBP12.01□□□□□ -0.49
SREBF1-215ENST00000487401 SLC39A10Q9ULF5 831 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 PLCL2Q9UPR0 1127 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 ZKSCAN5Q9Y2L8 839 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 PCDHGB7Q9Y5F8 929 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 UBR5O95071 2799 aaPredicted RBP12.01□□□□□ -0.49
SREBF1-215ENST00000487401 MYO18BQ8IUG5 2567 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 IQCF5A8MTL0 148 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 ZNF185O15231 689 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 ZSCAN9O15535 394 aaPredicted RBP12□□□□□ -0.49
SREBF1-215ENST00000487401 GPC4O75487 556 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 CBSLP0DN79 551 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 AOAHP28039 575 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 PKLRP30613 574 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 OTX2P32243 289 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 CBSP35520 551 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 BASP1P80723 227 aaKnown RBP12□□□□□ -0.49
SREBF1-215ENST00000487401 KYNUQ16719 465 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 RHBDD2Q6NTF9 364 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 DRICH1Q6PGQ1 229 aaPredicted RBP12□□□□□ -0.49
SREBF1-215ENST00000487401 UNC5DQ6UXZ4 953 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 SDCCAG8Q86SQ7 713 aaPredicted RBP12□□□□□ -0.49
SREBF1-215ENST00000487401 LRRC6Q86X45 466 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 VRK3Q8IV63 474 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 DCUN1D3Q8IWE4 304 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 KRT222Q8N1A0 295 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 DNAJC22Q8N4W6 341 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 C2orf73Q8N5S3 287 aaPredicted RBP12□□□□□ -0.49
SREBF1-215ENST00000487401 TMEM102Q8N9M5 508 aaPredicted RBP12□□□□□ -0.49
SREBF1-215ENST00000487401 FLVCR1-AS1Q8TAF5 88 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 PROKR1Q8TCW9 393 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 ADAMTS17Q8TE56 1095 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 SKA2Q8WVK7 121 aaPredicted RBP12□□□□□ -0.49
SREBF1-215ENST00000487401 IP6K3Q96PC2 410 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 PANX3Q96QZ0 392 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 NDC1Q9BTX1 674 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 IL22Q9GZX6 179 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 EIF2B3Q9NR50 452 aaKnown RBP12□□□□□ -0.49
SREBF1-215ENST00000487401 INTS7Q9NVH2 962 aaKnown RBP12□□□□□ -0.49
SREBF1-215ENST00000487401 NDOR1Q9UHB4 597 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 GNPTGQ9UJJ9 305 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 SRPK3Q9UPE1 567 aa12□□□□□ -0.49
SREBF1-215ENST00000487401 PEX12O00623 359 aa11.99□□□□□ -0.49
SREBF1-215ENST00000487401 KPNA5O15131 536 aa11.99□□□□□ -0.49
SREBF1-215ENST00000487401 HCRTR1O43613 425 aa11.99□□□□□ -0.49
SREBF1-215ENST00000487401 CEP104O60308 925 aa11.99□□□□□ -0.49
SREBF1-215ENST00000487401 DPM1O60762 260 aa11.99□□□□□ -0.49
SREBF1-215ENST00000487401 VPS4BO75351 444 aa11.99□□□□□ -0.49
SREBF1-215ENST00000487401 SLCO2B1O94956 709 aa11.99□□□□□ -0.49
SREBF1-215ENST00000487401 IGHEP01854 428 aa11.99□□□□□ -0.49
SREBF1-215ENST00000487401 FGGP02679 453 aa11.99□□□□□ -0.49
SREBF1-215ENST00000487401 CCDC175P0C221 793 aa11.99□□□□□ -0.49
SREBF1-215ENST00000487401 CD9P21926 228 aa11.99□□□□□ -0.49
SREBF1-215ENST00000487401 ALAS2P22557 587 aa11.99□□□□□ -0.49
SREBF1-215ENST00000487401 PEBP1P30086 187 aaKnown RBP11.99□□□□□ -0.49
SREBF1-215ENST00000487401 FOLR3P41439 243 aa11.99□□□□□ -0.49
SREBF1-215ENST00000487401 GABRA4P48169 554 aa11.99□□□□□ -0.49
SREBF1-215ENST00000487401 CRADDP78560 199 aa11.99□□□□□ -0.49
SREBF1-215ENST00000487401 ATP1A4Q13733 1029 aa11.99□□□□□ -0.49
SREBF1-215ENST00000487401 SSPNQ14714 243 aa11.99□□□□□ -0.49
SREBF1-215ENST00000487401 SIX1Q15475 284 aaPredicted RBP11.99□□□□□ -0.49
SREBF1-215ENST00000487401 SF1Q15637 639 aaKnown RBP11.99□□□□□ -0.49
SREBF1-215ENST00000487401 NKAIN1Q4KMZ8 207 aa11.99□□□□□ -0.49
SREBF1-215ENST00000487401 PAPD7Q5XG87 772 aaKnown RBP11.99□□□□□ -0.49
SREBF1-215ENST00000487401 ZNF385CQ66K41 422 aaPredicted RBP11.99□□□□□ -0.49
SREBF1-215ENST00000487401 OTOAQ7RTW8 1153 aa11.99□□□□□ -0.49
SREBF1-215ENST00000487401 MCATQ8IVS2 390 aaKnown RBP11.99□□□□□ -0.49
SREBF1-215ENST00000487401 FAM20CQ8IXL6 584 aa11.99□□□□□ -0.49
SREBF1-215ENST00000487401 MPP5Q8N3R9 675 aa11.99□□□□□ -0.49
SREBF1-215ENST00000487401 RAB42Q8N4Z0 105 aa11.99□□□□□ -0.49
SREBF1-215ENST00000487401 LKAAEAR1Q8TD35 194 aa11.99□□□□□ -0.49
SREBF1-215ENST00000487401 GBP5Q96PP8 586 aa11.99□□□□□ -0.49
SREBF1-215ENST00000487401 MLXIPLQ9NP71 852 aa11.99□□□□□ -0.49
SREBF1-215ENST00000487401 HOMER3Q9NSC5 361 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms