RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 CELSR3Q9NYQ7 3312 aa4.05□□□□□ -1.76
SNRNP40-205ENST00000486941 BPTFQ12830 3046 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 FAM237AA0A1B0GTK4 181 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 A0A1B0GVL5 298 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 TARSL2A2RTX5 802 aaKnown RBP4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 FAM149AA5PLN7 773 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 LRRC72A6NJI9 287 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 AQP7P3A6NL99 342 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 YJEFN3A6XGL0 299 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 E7ENQ6 273 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 TULP2O00295 520 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 CETN3O15182 167 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 YKT6O15498 198 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 ACSL4O60488 711 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 UGDHO60701 494 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 TBL1XO60907 577 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 RNASEH1O60930 286 aaKnown RBP4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 WDR47O94967 919 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 LDOC1O95751 146 aaPredicted RBP4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 IGLV3-27P01718 113 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 WNT1P04628 370 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 SRPRAP08240 638 aaKnown RBP4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 CD63P08962 238 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 SETSIPP0DME0 302 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 T-ENOLP0DO92 83 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 VDRP11473 427 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 MYF5P13349 255 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 PFKFB1P16118 471 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 ABCB4P21439 1286 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 CD70P32970 193 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 HNF1BP35680 557 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 EIF2S3P41091 472 aaKnown RBP4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 SYKP43405 635 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 RXRGP48443 463 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 POLD2P49005 469 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 ARRB1P49407 418 aaPredicted RBP4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 MXI1P50539 228 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 ZNF84P51523 738 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 CCR5P51681 352 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 GALCP54803 685 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 C21orf59P57076 290 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 DAOAP59103 153 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 ST8SIA6P61647 398 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 YWHAEP62258 255 aaKnown RBP4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 ADIGQ0VDE8 80 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 BST2Q10589 180 aaKnown RBP4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 ILKQ13418 452 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 KCNJ12Q14500 433 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 GOLGA7BQ2TAP0 167 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 HNRNPA1L2Q32P51 320 aaKnown RBP4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 ZCWPW2Q504Y3 356 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 FAM133BQ5BKY9 247 aaKnown RBP4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 KCNT1Q5JUK3 1230 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 C9orf64Q5T6V5 341 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 MSANTD2Q6P1R3 559 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 RFWD3Q6PCD5 774 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 LCLAT1Q6UWP7 414 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 DHRS13Q6UX07 377 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 MARCH9Q86YJ5 346 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 ZC3H3Q8IXZ2 948 aaKnown RBP4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 SIX6OS1Q8N1H7 587 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 OR2T34Q8NGX1 318 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 WFDC5Q8TCV5 224 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 SAP25Q8TEE9 199 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 SLC35F5Q8WV83 523 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 IRGQQ8WZA9 623 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 NDRG1Q92597 394 aaKnown RBP4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 SNX21Q969T3 373 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 EME1Q96AY2 570 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 NXPE2Q96DL1 559 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 APIPQ96GX9 242 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 DDX50Q9BQ39 737 aaKnown RBP4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 PIMREGQ9BSJ6 248 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 MYLK2Q9H1R3 596 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 NEUROG2Q9H2A3 272 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 PABPC3Q9H361 631 aaKnown RBP4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 ERVMER34-1Q9H9K5 563 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 FBXL12Q9NXK8 326 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 ITGB1BP2Q9UKP3 347 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 TSPAN16Q9UKR8 245 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 PAXBP1Q9Y5B6 917 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 ZNF462Q96JM2 2506 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 RP1P56715 2156 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 NAV2Q8IVL1 2488 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 SPTA1P02549 2419 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 CFAP46Q8IYW2 2715 aa4.04□□□□□ -1.76
SNRNP40-205ENST00000486941 SMG1Q96Q15 3661 aaKnown RBP4.03□□□□□ -1.76
SNRNP40-205ENST00000486941 ASH1LQ9NR48 2969 aaKnown RBP4.03□□□□□ -1.76
SNRNP40-205ENST00000486941 ITIH6Q6UXX5 1313 aa4.03□□□□□ -1.76
SNRNP40-205ENST00000486941 EDDM13A0A1B0GTR0 161 aa4.03□□□□□ -1.76
SNRNP40-205ENST00000486941 GOLGA6L7A0A1B0GV03 622 aa4.03□□□□□ -1.76
SNRNP40-205ENST00000486941 A0A1W2PR77 199 aa4.03□□□□□ -1.76
SNRNP40-205ENST00000486941 TYW5A2RUC4 315 aaKnown RBP4.03□□□□□ -1.76
SNRNP40-205ENST00000486941 FAM47DPA6NHR8 397 aa4.03□□□□□ -1.76
SNRNP40-205ENST00000486941 A6NNC1 897 aa4.03□□□□□ -1.76
SNRNP40-205ENST00000486941 TLR4O00206 839 aa4.03□□□□□ -1.76
SNRNP40-205ENST00000486941 O00370 1275 aa4.03□□□□□ -1.76
SNRNP40-205ENST00000486941 FOXN3O00409 490 aaPredicted RBP4.03□□□□□ -1.76
SNRNP40-205ENST00000486941 PLK4O00444 970 aa4.03□□□□□ -1.76
SNRNP40-205ENST00000486941 PMM2O15305 246 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms