RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 MED10Q9BTT4 135 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 GABARAPL1Q9H0R8 117 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 MMP28Q9H239 520 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 ATP13A2Q9NQ11 1180 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 MUTYHQ9UIF7 546 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 PCTPQ9UKL6 214 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 ABCG2Q9UNQ0 655 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 NEU3Q9UQ49 428 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 DERAQ9Y315 318 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 ASB1Q9Y576 335 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 PCDHGB2Q9Y5G2 931 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 SNX8Q9Y5X2 465 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 DOCK1Q14185 1865 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 LINC00854A0A1B0GVQ3 168 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 IFRD1O00458 451 aaPredicted RBP10.42□□□□□ -0.74
CCDC171-208ENST00000486641 PIRO00625 290 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 ZNF780AO75290 641 aaPredicted RBP10.42□□□□□ -0.74
CCDC171-208ENST00000486641 MYCLP1P12525 358 aaPredicted RBP10.42□□□□□ -0.74
CCDC171-208ENST00000486641 TNFSF8P32971 234 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 HNF4AP41235 474 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 HTR6P50406 440 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 SUOXP51687 545 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 RPP38P78345 283 aaKnown RBP10.42□□□□□ -0.74
CCDC171-208ENST00000486641 GALNT3Q14435 633 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 GTDC1Q4AE62 458 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 RFTN2Q52LD8 501 aaPredicted RBP10.42□□□□□ -0.74
CCDC171-208ENST00000486641 GPAT3Q53EU6 434 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 PAQR3Q6TCH7 311 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 SNX20Q7Z614 316 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 ENTHD1Q8IYW4 607 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 ZMIZ2Q8NF64 920 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 SLC13A3Q8WWT9 602 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 RNF34Q969K3 372 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 TMCO6Q96DC7 493 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 ZBED3Q96IU2 234 aaPredicted RBP10.42□□□□□ -0.74
CCDC171-208ENST00000486641 CEP19Q96LK0 163 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 GON7Q9BXV9 100 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 ATP13A1Q9HD20 1204 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 AMBNQ9NP70 447 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 HECAQ9UBI9 543 aaPredicted RBP10.42□□□□□ -0.74
CCDC171-208ENST00000486641 POLR3HQ9Y535 204 aaPredicted RBP10.42□□□□□ -0.74
CCDC171-208ENST00000486641 DIRAS1O95057 198 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 MLYCDO95822 493 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 CBLP22681 906 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 NRIP1P48552 1158 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 ERVPABLB-1P60509 514 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 MAXP61244 160 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 CD83Q01151 205 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 IHHQ14623 411 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 BAK1Q16611 211 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 SETMARQ53H47 684 aaPredicted RBP10.41□□□□□ -0.74
CCDC171-208ENST00000486641 RUNDC3AQ59EK9 446 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 ZMAT1Q5H9K5 638 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 ARMC4Q5T2S8 1044 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 KIAA1614Q5VZ46 1190 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 IDO2Q6ZQW0 420 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 GPRIN3Q6ZVF9 776 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 CHST13Q8NET6 341 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 OR52B6Q8NGF0 335 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 SETD6Q8TBK2 473 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 ZNF675Q8TD23 568 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 FUBP1Q96AE4 644 aaKnown RBP10.41□□□□□ -0.74
CCDC171-208ENST00000486641 PRRG3Q9BZD7 231 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 NARFLQ9H6Q4 476 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 PDP1Q9P0J1 537 aaPredicted RBP10.41□□□□□ -0.74
CCDC171-208ENST00000486641 TRAPPC4Q9Y296 219 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 B8ZZF3 427 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 GABRDO14764 452 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 CD3EAPO15446 510 aaKnown RBP10.41□□□□□ -0.74
CCDC171-208ENST00000486641 TMCC2O75069 709 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 SLITRK5O94991 958 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 GLP2RO95838 553 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 F9P00740 461 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 VIPP01282 170 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 TRAPPC2P0DI81 140 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 TRAPPC2BP0DI82 140 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 SOX6P35712 828 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 NUDT1P36639 197 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 CD86P42081 329 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 ARHGDIAP52565 204 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 ELP6Q0PNE2 266 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 TARDBPQ13148 414 aaKnown RBP eCLIP10.41□□□□□ -0.74
CCDC171-208ENST00000486641 TBCEQ15813 527 aaPredicted RBP10.41□□□□□ -0.74
CCDC171-208ENST00000486641 MAPKAPK3Q16644 382 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 AP5B1Q2VPB7 878 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 OR2T5Q6IEZ7 315 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 IL27RAQ6UWB1 636 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 ARMCX2Q7L311 632 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 ADAMTSL2Q86TH1 951 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 GLB1L3Q8NCI6 653 aaPredicted RBP10.41□□□□□ -0.74
CCDC171-208ENST00000486641 OR56A4Q8NGH8 313 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 OR2T29Q8NH02 315 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 PPP1R2P1Q96PQ5 205 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 MCCC1Q96RQ3 725 aaPredicted RBP10.41□□□□□ -0.74
CCDC171-208ENST00000486641 GOLGA2P5Q9HBQ8 144 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 SLC6A13Q9NSD5 602 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 HOXC10Q9NYD6 342 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 PSORS1C1Q9UIG5 152 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 FAM50BQ9Y247 325 aa10.41□□□□□ -0.74
CCDC171-208ENST00000486641 KLHL20Q9Y2M5 609 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms