RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 KCNJ9Q92806 393 aa18.53■□□□□ 0.56
SNX17-206ENST00000484886 IL17FQ96PD4 163 aa18.53■□□□□ 0.56
SNX17-206ENST00000484886 NDNQ99608 321 aa18.53■□□□□ 0.56
SNX17-206ENST00000484886 GPR21Q99679 349 aa18.53■□□□□ 0.56
SNX17-206ENST00000484886 WDR83Q9BRX9 315 aaKnown RBP18.53■□□□□ 0.56
SNX17-206ENST00000484886 FANCEQ9HB96 536 aa18.53■□□□□ 0.56
SNX17-206ENST00000484886 SAYSD1Q9NPB0 183 aa18.53■□□□□ 0.56
SNX17-206ENST00000484886 LATS2Q9NRM7 1088 aa18.53■□□□□ 0.56
SNX17-206ENST00000484886 SLC17A6Q9P2U8 582 aa18.53■□□□□ 0.56
SNX17-206ENST00000484886 LNPEPQ9UIQ6 1025 aa18.53■□□□□ 0.56
SNX17-206ENST00000484886 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.52■□□□□ 0.56
SNX17-206ENST00000484886 RAD1O60671 282 aa18.52■□□□□ 0.56
SNX17-206ENST00000484886 TUBB4AP04350 444 aa18.52■□□□□ 0.56
SNX17-206ENST00000484886 PVRP15151 417 aa18.52■□□□□ 0.56
SNX17-206ENST00000484886 PLTPP55058 493 aa18.52■□□□□ 0.56
SNX17-206ENST00000484886 GPR19Q15760 415 aa18.52■□□□□ 0.56
SNX17-206ENST00000484886 KLHL38Q2WGJ6 581 aa18.52■□□□□ 0.56
SNX17-206ENST00000484886 ARHGAP40Q5TG30 622 aa18.52■□□□□ 0.56
SNX17-206ENST00000484886 TRMT10BQ6PF06 316 aaKnown RBP18.52■□□□□ 0.56
SNX17-206ENST00000484886 KIAA0408Q6ZU52 694 aa18.52■□□□□ 0.56
SNX17-206ENST00000484886 NLGN4XQ8N0W4 816 aa18.52■□□□□ 0.56
SNX17-206ENST00000484886 D2HGDHQ8N465 521 aa18.52■□□□□ 0.56
SNX17-206ENST00000484886 NLGN4YQ8NFZ3 816 aaPredicted RBP18.52■□□□□ 0.56
SNX17-206ENST00000484886 MAGEC3Q8TD91 643 aa18.52■□□□□ 0.56
SNX17-206ENST00000484886 PYROXD1Q8WU10 500 aa18.52■□□□□ 0.56
SNX17-206ENST00000484886 INPP5DQ92835 1189 aa18.52■□□□□ 0.56
SNX17-206ENST00000484886 RAD51AP1Q96B01 352 aa18.52■□□□□ 0.56
SNX17-206ENST00000484886 SLC30A3Q99726 388 aa18.52■□□□□ 0.56
SNX17-206ENST00000484886 AARSD1Q9BTE6 412 aaKnown RBP18.52■□□□□ 0.56
SNX17-206ENST00000484886 RAB11FIP5Q9BXF6 653 aa18.52■□□□□ 0.56
SNX17-206ENST00000484886 FGF21Q9NSA1 209 aa18.52■□□□□ 0.56
SNX17-206ENST00000484886 SPHK1Q9NYA1 384 aa18.52■□□□□ 0.56
SNX17-206ENST00000484886 GRHL1Q9NZI5 618 aa18.52■□□□□ 0.56
SNX17-206ENST00000484886 ZFATQ9P243 1243 aa18.52■□□□□ 0.56
SNX17-206ENST00000484886 TRMT6Q9UJA5 497 aaKnown RBP18.52■□□□□ 0.56
SNX17-206ENST00000484886 E7ESA3 106 aa18.51■□□□□ 0.55
SNX17-206ENST00000484886 KIAA0754O94854 1291 aa18.51■□□□□ 0.55
SNX17-206ENST00000484886 C1orf105O95561 183 aa18.51■□□□□ 0.55
SNX17-206ENST00000484886 FGF5P12034 268 aa18.51■□□□□ 0.55
SNX17-206ENST00000484886 ST6GAL1P15907 406 aa18.51■□□□□ 0.55
SNX17-206ENST00000484886 TUBB4BP68371 445 aa18.51■□□□□ 0.55
SNX17-206ENST00000484886 CAV1Q03135 178 aa18.51■□□□□ 0.55
SNX17-206ENST00000484886 TUBB2AQ13885 445 aa18.51■□□□□ 0.55
SNX17-206ENST00000484886 GBX1Q14549 363 aa18.51■□□□□ 0.55
SNX17-206ENST00000484886 KIR2DS3Q14952 304 aa18.51■□□□□ 0.55
SNX17-206ENST00000484886 CCDC25Q86WR0 208 aa18.51■□□□□ 0.55
SNX17-206ENST00000484886 DTX1Q86Y01 620 aa18.51■□□□□ 0.55
SNX17-206ENST00000484886 CNTN4Q8IWV2 1026 aa18.51■□□□□ 0.55
SNX17-206ENST00000484886 PALM2Q8IXS6 379 aa18.51■□□□□ 0.55
SNX17-206ENST00000484886 LMNTD1Q8N9Z9 388 aa18.51■□□□□ 0.55
SNX17-206ENST00000484886 MNS1Q8NEH6 495 aa18.51■□□□□ 0.55
SNX17-206ENST00000484886 NKD1Q969G9 470 aa18.51■□□□□ 0.55
SNX17-206ENST00000484886 TUBB2BQ9BVA1 445 aa18.51■□□□□ 0.55
SNX17-206ENST00000484886 PITPNM3Q9BZ71 974 aa18.51■□□□□ 0.55
SNX17-206ENST00000484886 PLAC1Q9HBJ0 212 aa18.51■□□□□ 0.55
SNX17-206ENST00000484886 PILRAQ9UKJ1 303 aa18.51■□□□□ 0.55
SNX17-206ENST00000484886 BTRCQ9Y297 605 aa18.51■□□□□ 0.55
SNX17-206ENST00000484886 RASGRF2O14827 1237 aa18.5■□□□□ 0.55
SNX17-206ENST00000484886 SPAG6O75602 509 aa18.5■□□□□ 0.55
SNX17-206ENST00000484886 AHSGP02765 367 aa18.5■□□□□ 0.55
SNX17-206ENST00000484886 CATP04040 527 aaKnown RBP18.5■□□□□ 0.55
SNX17-206ENST00000484886 CD9P21926 228 aa18.5■□□□□ 0.55
SNX17-206ENST00000484886 MCM3P25205 808 aa18.5■□□□□ 0.55
SNX17-206ENST00000484886 SLC7A5Q01650 507 aa18.5■□□□□ 0.55
SNX17-206ENST00000484886 VAC14Q08AM6 782 aa18.5■□□□□ 0.55
SNX17-206ENST00000484886 MGAT5Q09328 741 aa18.5■□□□□ 0.55
SNX17-206ENST00000484886 SRSF6Q13247 344 aaKnown RBP18.5■□□□□ 0.55
SNX17-206ENST00000484886 CCSMST1Q4G0I0 132 aa18.5■□□□□ 0.55
SNX17-206ENST00000484886 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.5■□□□□ 0.55
SNX17-206ENST00000484886 TEDDM1Q5T9Z0 273 aa18.5■□□□□ 0.55
SNX17-206ENST00000484886 UGT3A1Q6NUS8 523 aa18.5■□□□□ 0.55
SNX17-206ENST00000484886 GPR155Q7Z3F1 870 aa18.5■□□□□ 0.55
SNX17-206ENST00000484886 GPATCH11Q8N954 259 aa18.5■□□□□ 0.55
SNX17-206ENST00000484886 OR2L8Q8NGY9 312 aa18.5■□□□□ 0.55
SNX17-206ENST00000484886 GIMAP7Q8NHV1 300 aa18.5■□□□□ 0.55
SNX17-206ENST00000484886 KIF18AQ8NI77 898 aa18.5■□□□□ 0.55
SNX17-206ENST00000484886 N4BP2L2Q92802 583 aaPredicted RBP18.5■□□□□ 0.55
SNX17-206ENST00000484886 TRAPPC9Q96Q05 1148 aa18.5■□□□□ 0.55
SNX17-206ENST00000484886 OR2A14Q96R47 310 aa18.5■□□□□ 0.55
SNX17-206ENST00000484886 PRORYQ9H606 182 aa18.5■□□□□ 0.55
SNX17-206ENST00000484886 FAM114A2Q9NRY5 505 aa18.5■□□□□ 0.55
SNX17-206ENST00000484886 TAS2R13Q9NYV9 303 aa18.5■□□□□ 0.55
SNX17-206ENST00000484886 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.5■□□□□ 0.55
SNX17-206ENST00000484886 KLHL42Q9P2K6 505 aa18.5■□□□□ 0.55
SNX17-206ENST00000484886 DHRS7Q9Y394 339 aa18.5■□□□□ 0.55
SNX17-206ENST00000484886 TMEM184BQ9Y519 407 aaPredicted RBP18.5■□□□□ 0.55
SNX17-206ENST00000484886 PTPRQQ9UMZ3 2332 aa18.49■□□□□ 0.55
SNX17-206ENST00000484886 A0A0J9YY10 115 aa18.49■□□□□ 0.55
SNX17-206ENST00000484886 TEX51A0A1B0GUA7 166 aa18.49■□□□□ 0.55
SNX17-206ENST00000484886 KRT87PA6NCN2 255 aa18.49■□□□□ 0.55
SNX17-206ENST00000484886 TMEM150CB9EJG8 249 aa18.49■□□□□ 0.55
SNX17-206ENST00000484886 EIF3HO15372 352 aaKnown RBP eCLIP18.49■□□□□ 0.55
SNX17-206ENST00000484886 MATN4O95460 622 aa18.49■□□□□ 0.55
SNX17-206ENST00000484886 ENO3P13929 434 aaPredicted RBP18.49■□□□□ 0.55
SNX17-206ENST00000484886 ZNF28P17035 718 aa18.49■□□□□ 0.55
SNX17-206ENST00000484886 MAP4P27816 1152 aaKnown RBP18.49■□□□□ 0.55
SNX17-206ENST00000484886 GABRB3P28472 473 aa18.49■□□□□ 0.55
SNX17-206ENST00000484886 GRB7Q14451 532 aa18.49■□□□□ 0.55
SNX17-206ENST00000484886 RBM20Q5T481 1227 aaKnown RBP18.49■□□□□ 0.55
SNX17-206ENST00000484886 PWWP2BQ6NUJ5 590 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms