RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 ZDHHC3Q9NYG2 299 aa12.38□□□□□ -0.43
UBR4-213ENST00000483922 EURLQ9NYK6 297 aa12.38□□□□□ -0.43
UBR4-213ENST00000483922 LCMT1Q9UIC8 334 aa12.38□□□□□ -0.43
UBR4-213ENST00000483922 CRLS1Q9UJA2 301 aa12.38□□□□□ -0.43
UBR4-213ENST00000483922 ITPR3Q14573 2671 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 SNRNP200O75643 2136 aaKnown RBP12.37□□□□□ -0.43
UBR4-213ENST00000483922 A0A0J9YY10 115 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 A0A1B0GUH1 482 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 IFRD1O00458 451 aaPredicted RBP12.37□□□□□ -0.43
UBR4-213ENST00000483922 PCDH17O14917 1159 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 MAP3K7O43318 606 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 KLHL41O60662 606 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 CD63P08962 238 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 COMTP21964 271 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 PER3P56645 1201 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 KRTAP10-9P60411 292 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 RPA4Q13156 261 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 ART3Q13508 389 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 CDSNQ15517 529 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 B3GNTL1Q67FW5 361 aaPredicted RBP12.37□□□□□ -0.43
UBR4-213ENST00000483922 RPUSD3Q6P087 351 aaKnown RBP12.37□□□□□ -0.43
UBR4-213ENST00000483922 TTLL10Q6ZVT0 673 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 SNX20Q7Z614 316 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 LUZP1Q86V48 1076 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 LINC01555Q8NAE3 123 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 OR11G2Q8NGC1 345 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.37□□□□□ -0.43
UBR4-213ENST00000483922 NACC2Q96BF6 587 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 MOCOSQ96EN8 888 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 THOC3Q96J01 351 aaKnown RBP12.37□□□□□ -0.43
UBR4-213ENST00000483922 CNDP1Q96KN2 507 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 VAT1Q99536 393 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 GOLPH3Q9H4A6 298 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 SOX17Q9H6I2 414 aaPredicted RBP12.37□□□□□ -0.43
UBR4-213ENST00000483922 SPTLC3Q9NUV7 552 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 PLA2G3Q9NZ20 509 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 CTSFQ9UBX1 484 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 RSPH14Q9UHP6 348 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 CDC23Q9UJX2 597 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 PLCL2Q9UPR0 1127 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 CNTRLQ7Z7A1 2325 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 SVILO95425 2214 aa12.37□□□□□ -0.43
UBR4-213ENST00000483922 CCDC168Q8NDH2 2452 aa12.36□□□□□ -0.43
UBR4-213ENST00000483922 hCG_1818297A0A087WSY0 165 aa12.36□□□□□ -0.43
UBR4-213ENST00000483922 VSTM2BA6NLU5 285 aa12.36□□□□□ -0.43
UBR4-213ENST00000483922 SNRPB2P08579 225 aaKnown RBP12.36□□□□□ -0.43
UBR4-213ENST00000483922 ACRV1P26436 265 aa12.36□□□□□ -0.43
UBR4-213ENST00000483922 MST1P26927 711 aa12.36□□□□□ -0.43
UBR4-213ENST00000483922 MC4RP32245 332 aa12.36□□□□□ -0.43
UBR4-213ENST00000483922 OR1D4P47884 311 aa12.36□□□□□ -0.43
UBR4-213ENST00000483922 MARCKSL1P49006 195 aa12.36□□□□□ -0.43
UBR4-213ENST00000483922 UBASH3AP57075 661 aa12.36□□□□□ -0.43
UBR4-213ENST00000483922 GRB7Q14451 532 aa12.36□□□□□ -0.43
UBR4-213ENST00000483922 SPARCL1Q14515 664 aa12.36□□□□□ -0.43
UBR4-213ENST00000483922 BRD3Q15059 726 aa12.36□□□□□ -0.43
UBR4-213ENST00000483922 TLR1Q15399 786 aa12.36□□□□□ -0.43
UBR4-213ENST00000483922 TESK1Q15569 626 aa12.36□□□□□ -0.43
UBR4-213ENST00000483922 SLC5A12Q1EHB4 618 aa12.36□□□□□ -0.43
UBR4-213ENST00000483922 FCRL6Q6DN72 434 aa12.36□□□□□ -0.43
UBR4-213ENST00000483922 BZW1Q7L1Q6 419 aaKnown RBP12.36□□□□□ -0.43
UBR4-213ENST00000483922 MCATQ8IVS2 390 aaKnown RBP12.36□□□□□ -0.43
UBR4-213ENST00000483922 OR1N1Q8NGS0 311 aa12.36□□□□□ -0.43
UBR4-213ENST00000483922 N4BP2L2Q92802 583 aaPredicted RBP12.36□□□□□ -0.43
UBR4-213ENST00000483922 ULK4Q96C45 1275 aa12.36□□□□□ -0.43
UBR4-213ENST00000483922 CCDC120Q96HB5 630 aa12.36□□□□□ -0.43
UBR4-213ENST00000483922 DNAJC1Q96KC8 554 aaKnown RBP12.36□□□□□ -0.43
UBR4-213ENST00000483922 NDC1Q9BTX1 674 aa12.36□□□□□ -0.43
UBR4-213ENST00000483922 TRIM8Q9BZR9 551 aa12.36□□□□□ -0.43
UBR4-213ENST00000483922 LHPPQ9H008 270 aa12.36□□□□□ -0.43
UBR4-213ENST00000483922 GBA3Q9H227 469 aa12.36□□□□□ -0.43
UBR4-213ENST00000483922 SLC26A1Q9H2B4 701 aa12.36□□□□□ -0.43
UBR4-213ENST00000483922 TXLNGQ9NUQ3 528 aa12.36□□□□□ -0.43
UBR4-213ENST00000483922 DDX56Q9NY93 547 aaKnown RBP12.36□□□□□ -0.43
UBR4-213ENST00000483922 DNHD1Q96M86 4753 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 MYO7BQ6PIF6 2116 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 MTORP42345 2549 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 SLC5A10A0PJK1 596 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 HEATR9A2RTY3 570 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 C19orf84I3L1E1 186 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 ALBP02768 609 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 RALBP11234 206 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 MAGP20916 626 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 SHMT2P34897 504 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 GRIA3P42263 894 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 GEMP55040 296 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 MFAP5Q13361 173 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 TFDP2Q14188 446 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 NAA30Q147X3 362 aaPredicted RBP12.35□□□□□ -0.43
UBR4-213ENST00000483922 DBN1Q16643 649 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 ZNF630Q2M218 657 aaPredicted RBP12.35□□□□□ -0.43
UBR4-213ENST00000483922 ZXDCQ2QGD7 858 aaPredicted RBP12.35□□□□□ -0.43
UBR4-213ENST00000483922 GPR33Q49SQ1 333 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 ISLR2Q6UXK2 745 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 LAPTM4BQ86VI4 370 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 TBC1D21Q8IYX1 336 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 C2orf73Q8N5S3 287 aaPredicted RBP12.35□□□□□ -0.43
UBR4-213ENST00000483922 METTL27Q8N6F8 245 aaPredicted RBP12.35□□□□□ -0.43
UBR4-213ENST00000483922 P3H4Q92791 437 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 FKBP10Q96AY3 582 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 C8orf44Q96CB5 159 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms