RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 PDE10AQ9Y233 779 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 A0A1W2PPM1 405 aa17.3■□□□□ 0.36
CPNE1-224ENST00000483359 ZW10O43264 779 aa17.3■□□□□ 0.36
CPNE1-224ENST00000483359 TCEA3O75764 348 aa17.3■□□□□ 0.36
CPNE1-224ENST00000483359 GUCA1CO95843 209 aa17.3■□□□□ 0.36
CPNE1-224ENST00000483359 CAPZBP47756 277 aa17.3■□□□□ 0.36
CPNE1-224ENST00000483359 GFERP55789 205 aa17.3■□□□□ 0.36
CPNE1-224ENST00000483359 INSM1Q01101 510 aaPredicted RBP17.3■□□□□ 0.36
CPNE1-224ENST00000483359 SP140Q13342 867 aa17.3■□□□□ 0.36
CPNE1-224ENST00000483359 KRT71Q3SY84 523 aa17.3■□□□□ 0.36
CPNE1-224ENST00000483359 SBSNQ6UWP8 590 aa17.3■□□□□ 0.36
CPNE1-224ENST00000483359 PLD6Q8N2A8 252 aaKnown RBP17.3■□□□□ 0.36
CPNE1-224ENST00000483359 ZFPM2Q8WW38 1151 aa17.3■□□□□ 0.36
CPNE1-224ENST00000483359 PTERQ96BW5 349 aa17.3■□□□□ 0.36
CPNE1-224ENST00000483359 PKP4Q99569 1192 aa17.3■□□□□ 0.36
CPNE1-224ENST00000483359 MENTQ9BUN1 341 aa17.3■□□□□ 0.36
CPNE1-224ENST00000483359 IGSF5Q9NSI5 407 aa17.3■□□□□ 0.36
CPNE1-224ENST00000483359 ZNF358Q9NW07 568 aa17.3■□□□□ 0.36
CPNE1-224ENST00000483359 GSAPA4D1B5 854 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 PABPN1LA6NDY0 278 aaKnown RBP17.29■□□□□ 0.36
CPNE1-224ENST00000483359 BTN3A3O00478 584 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 LTA4HP09960 611 aaKnown RBP17.29■□□□□ 0.36
CPNE1-224ENST00000483359 H2AFXP16104 143 aaPredicted RBP17.29■□□□□ 0.36
CPNE1-224ENST00000483359 POLR2CP19387 275 aaPredicted RBP17.29■□□□□ 0.36
CPNE1-224ENST00000483359 RAB28P51157 221 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 CFHR1Q03591 330 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 CEP85LQ5SZL2 805 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 IRGCQ6NXR0 463 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 FRA10AC1Q70Z53 315 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 OOSP2Q86WS3 158 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 PPFIBP2Q8ND30 876 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 DENND1AQ8TEH3 1009 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 SLC12A9Q9BXP2 914 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 ALG9Q9H6U8 611 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 PARVBQ9HBI1 364 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 ABCF3Q9NUQ8 709 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 HRASLS2Q9NWW9 162 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 OR5K3A6NET4 321 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 NCF1BA6NI72 391 aaPredicted RBP17.29■□□□□ 0.36
CPNE1-224ENST00000483359 NCF1CA8MVU1 366 aaPredicted RBP17.29■□□□□ 0.36
CPNE1-224ENST00000483359 D6RAR5 112 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 KDM1AO60341 852 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 CPNE6O95741 557 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 SLC16A8O95907 504 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 MT-ND3P03897 115 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 MPOP05164 745 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 NCF1P14598 390 aaPredicted RBP17.29■□□□□ 0.36
CPNE1-224ENST00000483359 HOXB3P14651 431 aaPredicted RBP17.29■□□□□ 0.36
CPNE1-224ENST00000483359 TFEBP19484 476 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 PKLRP30613 574 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 SHMT2P34897 504 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 TSTA3Q13630 321 aaPredicted RBP17.29■□□□□ 0.36
CPNE1-224ENST00000483359 OR4D1Q15615 310 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 SNAP47Q5SQN1 464 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 HES3Q5TGS1 186 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 IQCKQ8N0W5 287 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 LINC01555Q8NAE3 123 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 OR9A1PQ8NGU1 263 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 MCOLN3Q8TDD5 553 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 TGM7Q96PF1 710 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 CENPHQ9H3R5 247 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 ARL15Q9NXU5 204 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 ANKRD12Q6UB98 2062 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 UNC13CQ8NB66 2214 aa17.29■□□□□ 0.36
CPNE1-224ENST00000483359 MYO1CO00159 1063 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 NTN3O00634 580 aaPredicted RBP17.28■□□□□ 0.36
CPNE1-224ENST00000483359 HIST1H2AGP0C0S8 130 aaPredicted RBP17.28■□□□□ 0.36
CPNE1-224ENST00000483359 PYGBP11216 843 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 HIST1H2ADP20671 130 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 ATP6V0D1P61421 351 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 E2F1Q01094 437 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 FASTKQ14296 549 aaKnown RBP17.28■□□□□ 0.36
CPNE1-224ENST00000483359 CASP8Q14790 479 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 PPP1R3AQ16821 1122 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 FAM83EQ2M2I3 478 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 TIFABQ6ZNK6 161 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 ADAMTSL2Q86TH1 951 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 RASGRP3Q8IV61 690 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 RAB42Q8N4Z0 105 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 HIST1H2AHQ96KK5 128 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 HIST1H2AJQ99878 128 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 H2AFJQ9BTM1 129 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 ROPN1BQ9BZX4 212 aaPredicted RBP17.28■□□□□ 0.36
CPNE1-224ENST00000483359 ROPN1Q9HAT0 212 aaPredicted RBP17.28■□□□□ 0.36
CPNE1-224ENST00000483359 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.28■□□□□ 0.36
CPNE1-224ENST00000483359 SLC16A5O15375 505 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 CAPN5O15484 640 aaPredicted RBP17.28■□□□□ 0.36
CPNE1-224ENST00000483359 DKK1O94907 266 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 KLHL2O95198 593 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 PRKAA1Q13131 559 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 ARMC6Q6NXE6 501 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 KLHL35Q6PF15 583 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 FAM92BQ6ZTR7 304 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 B3GNT8Q7Z7M8 397 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 SYTL1Q8IYJ3 562 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 ADGRF3Q8IZF5 1079 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 RIBC1Q8N443 379 aaPredicted RBP17.28■□□□□ 0.36
CPNE1-224ENST00000483359 NMRAL1Q9HBL8 299 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 SPHK1Q9NYA1 384 aa17.28■□□□□ 0.36
CPNE1-224ENST00000483359 RNF112Q9ULX5 631 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms