RNA–Protein interactions for RNA: ENST00000483216.1

USP40-213, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 4

Gene USP40, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-213ENST00000483216 VPREB1P12018 145 aa5.48□□□□□ -1.53
USP40-213ENST00000483216 GNAZP19086 355 aa5.48□□□□□ -1.53
USP40-213ENST00000483216 SAT1P21673 171 aa5.48□□□□□ -1.53
USP40-213ENST00000483216 THOP1P52888 689 aa5.48□□□□□ -1.53
USP40-213ENST00000483216 SNX16P57768 344 aa5.48□□□□□ -1.53
USP40-213ENST00000483216 TPM4P67936 248 aa5.48□□□□□ -1.53
USP40-213ENST00000483216 LMOD3Q0VAK6 560 aa5.48□□□□□ -1.53
USP40-213ENST00000483216 PRKAA1Q13131 559 aa5.48□□□□□ -1.53
USP40-213ENST00000483216 DHRS7BQ6IAN0 325 aaPredicted RBP5.48□□□□□ -1.53
USP40-213ENST00000483216 RBMS3Q6XE24 437 aaKnown RBP5.48□□□□□ -1.53
USP40-213ENST00000483216 BRINP3Q76B58 766 aa5.48□□□□□ -1.53
USP40-213ENST00000483216 RPAINQ86UA6 219 aa5.48□□□□□ -1.53
USP40-213ENST00000483216 PLD3Q8IV08 490 aa5.48□□□□□ -1.53
USP40-213ENST00000483216 KRT222Q8N1A0 295 aa5.48□□□□□ -1.53
USP40-213ENST00000483216 CRYBG2Q8N1P7 616 aa5.48□□□□□ -1.53
USP40-213ENST00000483216 TRIM58Q8NG06 486 aa5.48□□□□□ -1.53
USP40-213ENST00000483216 DAZLQ92904 295 aaKnown RBP5.48□□□□□ -1.53
USP40-213ENST00000483216 NEK1Q96PY6 1258 aa5.48□□□□□ -1.53
USP40-213ENST00000483216 OR6C1Q96RD1 312 aa5.48□□□□□ -1.53
USP40-213ENST00000483216 MOV10L1Q9BXT6 1211 aaKnown RBP5.48□□□□□ -1.53
USP40-213ENST00000483216 FAM107BQ9H098 131 aa5.48□□□□□ -1.53
USP40-213ENST00000483216 GIMAP4Q9NUV9 329 aa5.48□□□□□ -1.53
USP40-213ENST00000483216 ADPRHL2Q9NX46 363 aa5.48□□□□□ -1.53
USP40-213ENST00000483216 BCCIPQ9P287 314 aaKnown RBP eCLIP5.48□□□□□ -1.53
USP40-213ENST00000483216 TMEM5Q9Y2B1 443 aa5.48□□□□□ -1.53
USP40-213ENST00000483216 PTRH2Q9Y3E5 179 aaKnown RBP5.48□□□□□ -1.53
USP40-213ENST00000483216 PIK3C2BO00750 1634 aa5.48□□□□□ -1.53
USP40-213ENST00000483216 NLRP1Q9C000 1473 aa5.47□□□□□ -1.53
USP40-213ENST00000483216 NSD2O96028 1365 aa5.47□□□□□ -1.53
USP40-213ENST00000483216 PRSS51A0A1B0GVH4 220 aa5.47□□□□□ -1.53
USP40-213ENST00000483216 PRR32B1ATL7 298 aa5.47□□□□□ -1.53
USP40-213ENST00000483216 ADAMDEC1O15204 470 aa5.47□□□□□ -1.53
USP40-213ENST00000483216 ERVK-10P10266 1014 aa5.47□□□□□ -1.53
USP40-213ENST00000483216 PSMC4P43686 418 aa5.47□□□□□ -1.53
USP40-213ENST00000483216 PLA2G7Q13093 441 aa5.47□□□□□ -1.53
USP40-213ENST00000483216 NTRK2Q16620 822 aa5.47□□□□□ -1.53
USP40-213ENST00000483216 ALDH1L2Q3SY69 923 aa5.47□□□□□ -1.53
USP40-213ENST00000483216 C20orf194Q5TEA3 1177 aa5.47□□□□□ -1.53
USP40-213ENST00000483216 ADAM5Q6NVV9 412 aa5.47□□□□□ -1.53
USP40-213ENST00000483216 LINGO4Q6UY18 593 aa5.47□□□□□ -1.53
USP40-213ENST00000483216 PAPD5Q8NDF8 572 aaKnown RBP5.47□□□□□ -1.53
USP40-213ENST00000483216 MNS1Q8NEH6 495 aa5.47□□□□□ -1.53
USP40-213ENST00000483216 WDR20Q8TBZ3 569 aa5.47□□□□□ -1.53
USP40-213ENST00000483216 PTPMT1Q8WUK0 201 aaPredicted RBP5.47□□□□□ -1.53
USP40-213ENST00000483216 ARHGAP45Q92619 1136 aa5.47□□□□□ -1.53
USP40-213ENST00000483216 MTERF3Q96E29 417 aa5.47□□□□□ -1.53
USP40-213ENST00000483216 RSRC1Q96IZ7 334 aaKnown RBP5.47□□□□□ -1.53
USP40-213ENST00000483216 C16orf70Q9BSU1 422 aa5.47□□□□□ -1.53
USP40-213ENST00000483216 ABHD6Q9BV23 337 aa5.47□□□□□ -1.53
USP40-213ENST00000483216 MMP27Q9H306 513 aa5.47□□□□□ -1.53
USP40-213ENST00000483216 ZNF696Q9H7X3 374 aa5.47□□□□□ -1.53
USP40-213ENST00000483216 OLFML3Q9NRN5 406 aa5.47□□□□□ -1.53
USP40-213ENST00000483216 PTTG2Q9NZH5 202 aa5.47□□□□□ -1.53
USP40-213ENST00000483216 ERRFI1Q9UJM3 462 aaPredicted RBP5.47□□□□□ -1.53
USP40-213ENST00000483216 SPIN1Q9Y657 262 aaPredicted RBP5.47□□□□□ -1.53
USP40-213ENST00000483216 SIGLEC1Q9BZZ2 1709 aa5.47□□□□□ -1.53
USP40-213ENST00000483216 FLT1P17948 1338 aa5.47□□□□□ -1.53
USP40-213ENST00000483216 KIF24Q5T7B8 1368 aa5.46□□□□□ -1.54
USP40-213ENST00000483216 ANKRD36BQ8N2N9 1353 aa5.46□□□□□ -1.54
USP40-213ENST00000483216 DUXAA6NLW8 204 aa5.46□□□□□ -1.54
USP40-213ENST00000483216 MAGEB17A8MXT2 336 aa5.46□□□□□ -1.54
USP40-213ENST00000483216 EDIL3O43854 480 aa5.46□□□□□ -1.54
USP40-213ENST00000483216 ENTPD3O75355 529 aa5.46□□□□□ -1.54
USP40-213ENST00000483216 CSPG5O95196 566 aa5.46□□□□□ -1.54
USP40-213ENST00000483216 IGHDP01880 384 aa5.46□□□□□ -1.54
USP40-213ENST00000483216 LIFP15018 202 aa5.46□□□□□ -1.54
USP40-213ENST00000483216 HOXC8P31273 242 aa5.46□□□□□ -1.54
USP40-213ENST00000483216 RPS18P62269 152 aaKnown RBP5.46□□□□□ -1.54
USP40-213ENST00000483216 NUCB1Q02818 461 aa5.46□□□□□ -1.54
USP40-213ENST00000483216 PNRC1Q12796 327 aaPredicted RBP5.46□□□□□ -1.54
USP40-213ENST00000483216 STK4Q13043 487 aa5.46□□□□□ -1.54
USP40-213ENST00000483216 NR1D2Q14995 579 aa5.46□□□□□ -1.54
USP40-213ENST00000483216 GRTP1Q5TC63 336 aa5.46□□□□□ -1.54
USP40-213ENST00000483216 ARHGAP17Q68EM7 881 aa5.46□□□□□ -1.54
USP40-213ENST00000483216 TMCO3Q6UWJ1 677 aa5.46□□□□□ -1.54
USP40-213ENST00000483216 JAKMIP2Q96AA8 810 aa5.46□□□□□ -1.54
USP40-213ENST00000483216 SLC22A18Q96BI1 424 aa5.46□□□□□ -1.54
USP40-213ENST00000483216 LGALS12Q96DT0 336 aa5.46□□□□□ -1.54
USP40-213ENST00000483216 SLC47A1Q96FL8 570 aa5.46□□□□□ -1.54
USP40-213ENST00000483216 SGK494Q96LW2 274 aa5.46□□□□□ -1.54
USP40-213ENST00000483216 PSD2Q9BQI7 771 aa5.46□□□□□ -1.54
USP40-213ENST00000483216 COQ3Q9NZJ6 369 aa5.46□□□□□ -1.54
USP40-213ENST00000483216 WBP11Q9Y2W2 641 aaKnown RBP5.46□□□□□ -1.54
USP40-213ENST00000483216 QRICH2Q9H0J4 1663 aa5.46□□□□□ -1.54
USP40-213ENST00000483216 ADGRB1O14514 1584 aa5.46□□□□□ -1.54
USP40-213ENST00000483216 NEXMIFQ5QGS0 1516 aa5.45□□□□□ -1.54
USP40-213ENST00000483216 LOC102723996A0A087X1L8 192 aa5.45□□□□□ -1.54
USP40-213ENST00000483216 A0A0G2JLW4 131 aa5.45□□□□□ -1.54
USP40-213ENST00000483216 HEPACAM2A8MVW5 462 aa5.45□□□□□ -1.54
USP40-213ENST00000483216 PRAMEF11O60813 436 aa5.45□□□□□ -1.54
USP40-213ENST00000483216 PATE4P0C8F1 98 aa5.45□□□□□ -1.54
USP40-213ENST00000483216 EIF2DP41214 584 aaKnown RBP5.45□□□□□ -1.54
USP40-213ENST00000483216 STAT2P52630 851 aa5.45□□□□□ -1.54
USP40-213ENST00000483216 PSMC6P62333 389 aa5.45□□□□□ -1.54
USP40-213ENST00000483216 CDK3Q00526 305 aa5.45□□□□□ -1.54
USP40-213ENST00000483216 GRAPQ13588 217 aa5.45□□□□□ -1.54
USP40-213ENST00000483216 MRGPRG-AS1Q2M3A8 158 aa5.45□□□□□ -1.54
USP40-213ENST00000483216 CCDC183Q5T5S1 534 aa5.45□□□□□ -1.54
USP40-213ENST00000483216 CEP57Q86XR8 500 aa5.45□□□□□ -1.54
USP40-213ENST00000483216 APLFQ8IW19 511 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms