RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 SHMT2P34897 504 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 RIPPLY3P57055 190 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 BRD3Q15059 726 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 TLR1Q15399 786 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 GPR33Q49SQ1 333 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 KIRREL2Q6UWL6 708 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 TTLL10Q6ZVT0 673 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 MICALCLQ6ZW33 695 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 SERPINA9Q86WD7 417 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 MCATQ8IVS2 390 aaKnown RBP12.33□□□□□ -0.44
TMEM54-206ENST00000482771 RHOT2Q8IXI1 618 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 FAM20CQ8IXL6 584 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 OR8K1Q8NGG5 319 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 FLVCR1-AS1Q8TAF5 88 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 COG1Q8WTW3 980 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 QKIQ96PU8 341 aaKnown RBP eCLIP12.33□□□□□ -0.44
TMEM54-206ENST00000482771 GORASP1Q9BQQ3 440 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 EURLQ9NYK6 297 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 ASF1AQ9Y294 204 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 KLHL20Q9Y2M5 609 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.33□□□□□ -0.44
TMEM54-206ENST00000482771 IGLV3-16A0A075B6K0 115 aa12.32□□□□□ -0.44
TMEM54-206ENST00000482771 H7C0C1 242 aa12.32□□□□□ -0.44
TMEM54-206ENST00000482771 SOCS6O14544 535 aa12.32□□□□□ -0.44
TMEM54-206ENST00000482771 JRKO75564 520 aa12.32□□□□□ -0.44
TMEM54-206ENST00000482771 ZRANB2O95218 330 aaKnown RBP eCLIP12.32□□□□□ -0.44
TMEM54-206ENST00000482771 PRSS56P0CW18 603 aa12.32□□□□□ -0.44
TMEM54-206ENST00000482771 PIM1P11309 404 aaPredicted RBP12.32□□□□□ -0.44
TMEM54-206ENST00000482771 ACADLP28330 430 aa12.32□□□□□ -0.44
TMEM54-206ENST00000482771 ATP5OP48047 213 aa12.32□□□□□ -0.44
TMEM54-206ENST00000482771 ZNF140P52738 457 aaPredicted RBP12.32□□□□□ -0.44
TMEM54-206ENST00000482771 SPARCL1Q14515 664 aa12.32□□□□□ -0.44
TMEM54-206ENST00000482771 TFDP3Q5H9I0 405 aa12.32□□□□□ -0.44
TMEM54-206ENST00000482771 B3GNTL1Q67FW5 361 aaPredicted RBP12.32□□□□□ -0.44
TMEM54-206ENST00000482771 LINC00696Q6ZRV3 163 aa12.32□□□□□ -0.44
TMEM54-206ENST00000482771 SHISA6Q6ZSJ9 500 aa12.32□□□□□ -0.44
TMEM54-206ENST00000482771 RCOR2Q8IZ40 523 aa12.32□□□□□ -0.44
TMEM54-206ENST00000482771 OR1N1Q8NGS0 311 aa12.32□□□□□ -0.44
TMEM54-206ENST00000482771 THOC3Q96J01 351 aaKnown RBP12.32□□□□□ -0.44
TMEM54-206ENST00000482771 CHP1Q99653 195 aa12.32□□□□□ -0.44
TMEM54-206ENST00000482771 HEMGNQ9BXL5 484 aa12.32□□□□□ -0.44
TMEM54-206ENST00000482771 LHPPQ9H008 270 aa12.32□□□□□ -0.44
TMEM54-206ENST00000482771 GBA3Q9H227 469 aa12.32□□□□□ -0.44
TMEM54-206ENST00000482771 EPS8L2Q9H6S3 715 aa12.32□□□□□ -0.44
TMEM54-206ENST00000482771 SPTLC3Q9NUV7 552 aa12.32□□□□□ -0.44
TMEM54-206ENST00000482771 OR6C2Q9NZP2 312 aa12.32□□□□□ -0.44
TMEM54-206ENST00000482771 IFNKQ9P0W0 207 aa12.32□□□□□ -0.44
TMEM54-206ENST00000482771 POLG2Q9UHN1 485 aa12.32□□□□□ -0.44
TMEM54-206ENST00000482771 PLAGL1Q9UM63 463 aa12.32□□□□□ -0.44
TMEM54-206ENST00000482771 AAR2Q9Y312 384 aaKnown RBP12.32□□□□□ -0.44
TMEM54-206ENST00000482771 HS3ST3B1Q9Y662 390 aa12.32□□□□□ -0.44
TMEM54-206ENST00000482771 PDZD2O15018 2839 aa12.32□□□□□ -0.44
TMEM54-206ENST00000482771 MTORP42345 2549 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 hCG_1818297A0A087WSY0 165 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 HEATR9A2RTY3 570 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 KLHL18O94889 574 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 ONECUT2O95948 504 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 ALBP02768 609 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 ITGAXP20702 1163 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 ACRV1P26436 265 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 ARSFP54793 590 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 Q0VFX4 171 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 PRPSAP1Q14558 356 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 NKG7Q16617 165 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 SLC5A12Q1EHB4 618 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 ZXDCQ2QGD7 858 aaPredicted RBP12.31□□□□□ -0.44
TMEM54-206ENST00000482771 SKOR2Q2VWA4 1001 aaPredicted RBP12.31□□□□□ -0.44
TMEM54-206ENST00000482771 FCRL6Q6DN72 434 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 ITPRIPL1Q6GPH6 555 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 DENND5AQ6IQ26 1287 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 CAVIN1Q6NZI2 390 aaKnown RBP12.31□□□□□ -0.44
TMEM54-206ENST00000482771 FAM180AQ6UWF9 173 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 ISLR2Q6UXK2 745 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 NAPRTQ6XQN6 538 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 CCDC50Q8IVM0 306 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 TBC1D21Q8IYX1 336 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 BCORP1Q8N888 145 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.31□□□□□ -0.44
TMEM54-206ENST00000482771 DLG3Q92796 817 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 RELTQ969Z4 430 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 DNAJC1Q96KC8 554 aaKnown RBP12.31□□□□□ -0.44
TMEM54-206ENST00000482771 LMF1Q96S06 567 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 SLX1AQ9BQ83 275 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 ANP32EQ9BTT0 268 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 SOX17Q9H6I2 414 aaPredicted RBP12.31□□□□□ -0.44
TMEM54-206ENST00000482771 IGSF5Q9NSI5 407 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 OLAHQ9NV23 265 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 ZNHIT6Q9NWK9 470 aaKnown RBP12.31□□□□□ -0.44
TMEM54-206ENST00000482771 SMARCAL1Q9NZC9 954 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 ALG6Q9Y672 507 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 PRSS21Q9Y6M0 314 aa12.31□□□□□ -0.44
TMEM54-206ENST00000482771 HIVEP1P15822 2718 aa12.3□□□□□ -0.44
TMEM54-206ENST00000482771 TRBV5-4A0A0C4DH59 114 aa12.3□□□□□ -0.44
TMEM54-206ENST00000482771 A0A1B0GX78 115 aa12.3□□□□□ -0.44
TMEM54-206ENST00000482771 BHMG1C9JSJ3 638 aaPredicted RBP12.3□□□□□ -0.44
TMEM54-206ENST00000482771 LIN7AO14910 233 aaPredicted RBP12.3□□□□□ -0.44
TMEM54-206ENST00000482771 GSTM1P09488 218 aa12.3□□□□□ -0.44
TMEM54-206ENST00000482771 TPH1P17752 444 aa12.3□□□□□ -0.44
TMEM54-206ENST00000482771 PSMB4P28070 264 aa12.3□□□□□ -0.44
TMEM54-206ENST00000482771 PEBP1P30086 187 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms