RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 RAB42Q8N4Z0 105 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 ZBTB2Q8N680 514 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 C19orf47Q8N9M1 422 aaKnown RBP11.49□□□□□ -0.57
HMGN1-213ENST00000482192 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.49□□□□□ -0.57
HMGN1-213ENST00000482192 FLVCR1-AS1Q8TAF5 88 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 CALML6Q8TD86 181 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 RAD51AP1Q96B01 352 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 SLC22A18Q96BI1 424 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 TCTN2Q96GX1 697 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 SIGLEC10Q96LC7 697 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 FOPNLQ96NB1 174 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 LRFN5Q96NI6 719 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 MENTQ9BUN1 341 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 RAB11FIP5Q9BXF6 653 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 KLHL25Q9H0H3 589 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 C20orf96Q9NUD7 363 aaPredicted RBP11.49□□□□□ -0.57
HMGN1-213ENST00000482192 SPHK1Q9NYA1 384 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 IL1RAPL1Q9NZN1 696 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 SERTAD3Q9UJW9 196 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 PCDHB3Q9Y5E6 796 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 CACNA1GO43497 2377 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 TMEM150CB9EJG8 249 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 E5RI56 91 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 CCDC188H7C350 402 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 RASGRF2O14827 1237 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 NKX2-8O15522 239 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 S1PR4O95977 384 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 FAM87AP0C7U9 286 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 PRKAR1AP10644 381 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 SFTPCP11686 197 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 TCN2P20062 427 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 CCNFP41002 786 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 SLC1A2P43004 574 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 DNASE1L3Q13609 305 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 GRB7Q14451 532 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 SLC5A12Q1EHB4 618 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 ZNF789Q5FWF6 425 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 IZUMO3Q5VZ72 239 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 CNSTQ6PJW8 725 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 CDHR3Q6ZTQ4 885 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 TRIM73Q86UV7 250 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 DENND6AQ8IWF6 608 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 ZNF843Q8N446 348 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 OR2L8Q8NGY9 312 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 OR1L3Q8NH93 324 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 MAGEC3Q8TD91 643 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 CT55Q8WUE5 264 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 N4BP2L2Q92802 583 aaPredicted RBP11.48□□□□□ -0.57
HMGN1-213ENST00000482192 FAM136AQ96C01 138 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 FAM167BQ9BTA0 163 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 NAT9Q9BTE0 207 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 GPR87Q9BY21 358 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 CHRNA10Q9GZZ6 450 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 CCDC68Q9H2F9 335 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 RNF14Q9UBS8 474 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 SLC39A10Q9ULF5 831 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 PCDHGA6Q9Y5G7 932 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 FAM169AQ9Y6X4 670 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 NBEAQ8NFP9 2946 aa11.48□□□□□ -0.57
HMGN1-213ENST00000482192 AHCTF1Q8WYP5 2266 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 E7EQ34 232 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 SMAPO00193 183 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 KATNA1O75449 491 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 C1orf105O95561 183 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 TTC4O95801 387 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 KLK3P07288 261 aaPredicted RBP11.47□□□□□ -0.57
HMGN1-213ENST00000482192 CYP2A7P20853 494 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 F8A1P23610 371 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 OAS2P29728 719 aaKnown RBP11.47□□□□□ -0.57
HMGN1-213ENST00000482192 PEBP1P30086 187 aaKnown RBP11.47□□□□□ -0.57
HMGN1-213ENST00000482192 CCR10P46092 362 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 ITGA1P56199 1179 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 GPS2Q13227 327 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 CTBP1Q13363 440 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 COL9A2Q14055 689 aaPredicted RBP11.47□□□□□ -0.57
HMGN1-213ENST00000482192 GBX1Q14549 363 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 CRYMQ14894 314 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 MORF4L2Q15014 288 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 TTLL9Q3SXZ7 439 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 C16orf46Q6P387 395 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 KCNMB4Q86W47 210 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 GPR135Q8IZ08 494 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 PDIK1LQ8N165 341 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 EXD3Q8N9H8 876 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 LINC01555Q8NAE3 123 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 SLC38A9Q8NBW4 561 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 GABPB2Q8TAK5 448 aaPredicted RBP11.47□□□□□ -0.57
HMGN1-213ENST00000482192 SEC14L1Q92503 715 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 KCNJ9Q92806 393 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 MR1Q95460 341 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 CLIP3Q96DZ5 547 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 IL17FQ96PD4 163 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 EBNA1BP2Q99848 306 aaKnown RBP11.47□□□□□ -0.57
HMGN1-213ENST00000482192 FAM117AQ9C073 453 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 SEMA4CQ9C0C4 833 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 SLC7A5P2Q9GIP4 190 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 ACTR5Q9H9F9 607 aaPredicted RBP11.47□□□□□ -0.57
HMGN1-213ENST00000482192 FAM60AQ9NP50 221 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 FBXO6Q9NRD1 293 aaPredicted RBP11.47□□□□□ -0.57
HMGN1-213ENST00000482192 CIDEBQ9UHD4 219 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms