RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 ZNF483Q8TF39 744 aaPredicted RBP17.09■□□□□ 0.33
UPF3A-206ENST00000480362 C7orf26Q96N11 449 aa17.09■□□□□ 0.33
UPF3A-206ENST00000480362 CAMK1GQ96NX5 476 aa17.09■□□□□ 0.33
UPF3A-206ENST00000480362 NSUN5Q96P11 429 aaKnown RBP17.09■□□□□ 0.33
UPF3A-206ENST00000480362 SORT1Q99523 831 aa17.09■□□□□ 0.33
UPF3A-206ENST00000480362 HGH1Q9BTY7 390 aa17.09■□□□□ 0.33
UPF3A-206ENST00000480362 FAM107BQ9H098 131 aa17.09■□□□□ 0.33
UPF3A-206ENST00000480362 ATG10Q9H0Y0 220 aa17.09■□□□□ 0.33
UPF3A-206ENST00000480362 MVB12BQ9H7P6 319 aa17.09■□□□□ 0.33
UPF3A-206ENST00000480362 ERVMER34-1Q9H9K5 563 aa17.09■□□□□ 0.33
UPF3A-206ENST00000480362 ZNF624Q9P2J8 865 aaPredicted RBP17.09■□□□□ 0.33
UPF3A-206ENST00000480362 HEBP2Q9Y5Z4 205 aa17.09■□□□□ 0.33
UPF3A-206ENST00000480362 COLEC10Q9Y6Z7 277 aa17.09■□□□□ 0.33
UPF3A-206ENST00000480362 ZDBF2Q9HCK1 2354 aa17.09■□□□□ 0.33
UPF3A-206ENST00000480362 GON4LQ3T8J9 2241 aa17.08■□□□□ 0.33
UPF3A-206ENST00000480362 PRAMEF33A0A0G2JMD5 474 aa17.08■□□□□ 0.32
UPF3A-206ENST00000480362 E2F3O00716 465 aa17.08■□□□□ 0.32
UPF3A-206ENST00000480362 SLC16A8O95907 504 aa17.08■□□□□ 0.32
UPF3A-206ENST00000480362 CHRNGP07510 517 aa17.08■□□□□ 0.32
UPF3A-206ENST00000480362 SLC19A1P41440 591 aa17.08■□□□□ 0.32
UPF3A-206ENST00000480362 DPP6P42658 865 aa17.08■□□□□ 0.32
UPF3A-206ENST00000480362 SLC6A12P48065 614 aa17.08■□□□□ 0.32
UPF3A-206ENST00000480362 CLCQ05315 142 aa17.08■□□□□ 0.32
UPF3A-206ENST00000480362 LPAL2Q16609 132 aa17.08■□□□□ 0.32
UPF3A-206ENST00000480362 PTCHD3Q3KNS1 767 aa17.08■□□□□ 0.32
UPF3A-206ENST00000480362 METTL2BQ6P1Q9 378 aaKnown RBP17.08■□□□□ 0.32
UPF3A-206ENST00000480362 IYDQ6PHW0 289 aa17.08■□□□□ 0.32
UPF3A-206ENST00000480362 GKN2Q86XP6 184 aa17.08■□□□□ 0.32
UPF3A-206ENST00000480362 CRLF3Q8IUI8 442 aa17.08■□□□□ 0.32
UPF3A-206ENST00000480362 TEX9Q8N6V9 391 aa17.08■□□□□ 0.32
UPF3A-206ENST00000480362 FAM46DQ8NEK8 389 aa17.08■□□□□ 0.32
UPF3A-206ENST00000480362 TRPC4APQ8TEL6 797 aa17.08■□□□□ 0.32
UPF3A-206ENST00000480362 ZNF480Q8WV37 535 aa17.08■□□□□ 0.32
UPF3A-206ENST00000480362 TRMOQ9BU70 441 aa17.08■□□□□ 0.32
UPF3A-206ENST00000480362 SHCBP1LQ9BZQ2 653 aa17.08■□□□□ 0.32
UPF3A-206ENST00000480362 SLC32A1Q9H598 525 aa17.08■□□□□ 0.32
UPF3A-206ENST00000480362 SEMA4BQ9NPR2 832 aaPredicted RBP17.08■□□□□ 0.32
UPF3A-206ENST00000480362 OPTCQ9UBM4 332 aa17.08■□□□□ 0.32
UPF3A-206ENST00000480362 POLG2Q9UHN1 485 aa17.08■□□□□ 0.32
UPF3A-206ENST00000480362 PLAGL1Q9UM63 463 aa17.08■□□□□ 0.32
UPF3A-206ENST00000480362 FANCMQ8IYD8 2048 aa17.08■□□□□ 0.32
UPF3A-206ENST00000480362 BDP1A6H8Y1 2624 aa17.07■□□□□ 0.32
UPF3A-206ENST00000480362 K7EPI3 171 aa17.07■□□□□ 0.32
UPF3A-206ENST00000480362 PPP6CO00743 305 aa17.07■□□□□ 0.32
UPF3A-206ENST00000480362 AQP9O43315 295 aa17.07■□□□□ 0.32
UPF3A-206ENST00000480362 SDC3O75056 442 aa17.07■□□□□ 0.32
UPF3A-206ENST00000480362 NAE1Q13564 534 aa17.07■□□□□ 0.32
UPF3A-206ENST00000480362 GTF2H2Q13888 395 aa17.07■□□□□ 0.32
UPF3A-206ENST00000480362 DUOXA1Q1HG43 343 aa17.07■□□□□ 0.32
UPF3A-206ENST00000480362 GTF2H2CQ6P1K8 395 aa17.07■□□□□ 0.32
UPF3A-206ENST00000480362 GOLGA7Q7Z5G4 137 aa17.07■□□□□ 0.32
UPF3A-206ENST00000480362 SYTL1Q8IYJ3 562 aa17.07■□□□□ 0.32
UPF3A-206ENST00000480362 LMNTD1Q8N9Z9 388 aa17.07■□□□□ 0.32
UPF3A-206ENST00000480362 PPFIBP2Q8ND30 876 aa17.07■□□□□ 0.32
UPF3A-206ENST00000480362 ZNF548Q8NEK5 533 aaPredicted RBP17.07■□□□□ 0.32
UPF3A-206ENST00000480362 PYCR2Q96C36 320 aa17.07■□□□□ 0.32
UPF3A-206ENST00000480362 CXorf40BQ96DE9 158 aa17.07■□□□□ 0.32
UPF3A-206ENST00000480362 IL17FQ96PD4 163 aa17.07■□□□□ 0.32
UPF3A-206ENST00000480362 CCT8L2Q96SF2 557 aa17.07■□□□□ 0.32
UPF3A-206ENST00000480362 ILKAPQ9H0C8 392 aaPredicted RBP17.07■□□□□ 0.32
UPF3A-206ENST00000480362 NSRP1Q9H0G5 558 aaKnown RBP17.07■□□□□ 0.32
UPF3A-206ENST00000480362 EML4Q9HC35 981 aaKnown RBP17.07■□□□□ 0.32
UPF3A-206ENST00000480362 ZBTB26Q9HCK0 441 aa17.07■□□□□ 0.32
UPF3A-206ENST00000480362 LNPEPQ9UIQ6 1025 aa17.07■□□□□ 0.32
UPF3A-206ENST00000480362 DOLKQ9UPQ8 538 aa17.07■□□□□ 0.32
UPF3A-206ENST00000480362 RAP2CQ9Y3L5 183 aa17.07■□□□□ 0.32
UPF3A-206ENST00000480362 ANGPTL3Q9Y5C1 460 aa17.07■□□□□ 0.32
UPF3A-206ENST00000480362 TDRD6O60522 2096 aaKnown RBP17.06■□□□□ 0.32
UPF3A-206ENST00000480362 VCANP13611 3396 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 OR5K4A6NMS3 321 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 UBFD1O14562 309 aaKnown RBP17.06■□□□□ 0.32
UPF3A-206ENST00000480362 YY2O15391 372 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 PIAS2O75928 621 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 WDR47O94967 919 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 SNUPNO95149 360 aaKnown RBP17.06■□□□□ 0.32
UPF3A-206ENST00000480362 CFIP05156 583 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 SLC2A4P14672 509 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 XRCC1P18887 633 aaPredicted RBP17.06■□□□□ 0.32
UPF3A-206ENST00000480362 MPSTP25325 297 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 NDUFS1P28331 727 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 HOXD12P35452 270 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 PNLIPRP1P54315 467 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 GALNT1Q10472 559 aaPredicted RBP17.06■□□□□ 0.32
UPF3A-206ENST00000480362 PRKAA1Q13131 559 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 RBBP7Q16576 425 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 LRRC70Q7Z2Q7 622 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 SFTPA2Q8IWL1 248 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 NAGSQ8N159 534 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 SDR16C5Q8N3Y7 309 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 ZNF781Q8N8C0 355 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 OR56A3Q8NH54 315 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 CEP76Q8TAP6 659 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 ZDHHC1Q8WTX9 485 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 PATE1Q8WXA2 126 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 MED8Q96G25 268 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 ELF4Q99607 663 aaPredicted RBP17.06■□□□□ 0.32
UPF3A-206ENST00000480362 NRTNQ99748 197 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 NOL11Q9H8H0 719 aaKnown RBP17.06■□□□□ 0.32
UPF3A-206ENST00000480362 PNPOQ9NVS9 261 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 SPATA7Q9P0W8 599 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms