RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 RBP1P09455 135 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 ALDOCP09972 364 aaKnown RBP12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 DBTP11182 482 aaKnown RBP12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 PSKH1P11801 424 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 HNRNPLP14866 589 aaKnown RBP eCLIP12.89□□□□□ -0.351e-6■□□□□ 9.1
CNKSR3-204ENST00000479339 HOXB6P17509 224 aaKnown RBP12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 SDC4P31431 198 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 TIE1P35590 1138 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 PIGAP37287 484 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 MTHFRP42898 656 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 ASPAP45381 313 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 MRPL19P49406 292 aaKnown RBP12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 GLUD2P49448 558 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 SCNN1GP51170 649 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 IFRD2Q12894 506 aaPredicted RBP12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 NFYCQ13952 458 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 SURF1Q15526 300 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 BCL7AQ4VC05 210 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 SH3PXD2AQ5TCZ1 1133 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 SCYL2Q6P3W7 929 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 SLC22A9Q8IVM8 553 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 BRSK2Q8IWQ3 736 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 ANKRD53Q8N9V6 530 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 ST13P5Q8NFI4 369 aaPredicted RBP12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 RPL3LQ92901 407 aaKnown RBP12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 ZFP42Q96MM3 310 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 ZSCAN5AQ9BUG6 496 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 PRDM8Q9NQV8 689 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 GPATCH2LQ9NWQ4 482 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 COMMD8Q9NX08 183 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 MARCH5Q9NX47 278 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 TEKT2Q9UIF3 430 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 AUP1Q9Y679 476 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 OAS3Q9Y6K5 1087 aaKnown RBP12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 LINC00862A6NCI5 91 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 EEF2KO00418 725 aaKnown RBP12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 PRMT5O14744 637 aaPredicted RBP12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 BCKDKO14874 412 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 LILRB3O75022 631 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 EFEMP2O95967 443 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 CYP11A1P05108 521 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 EDN1P05305 212 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 ACADMP11310 421 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 NCK1P16333 377 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 AKAP5P24588 427 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 HRH2P25021 359 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 UQCRC1P31930 480 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 MAP2K4P45985 399 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 MASP1P48740 699 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 BAMBIQ13145 260 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 DGCR6Q14129 220 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 CDO1Q16878 200 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 UGT3A2Q3SY77 523 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 SULT1C3Q6IMI6 304 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 FAM171BQ6P995 826 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 NRARPQ7Z6K4 114 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 CCDC190Q86UF4 302 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 HID1Q8IV36 788 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 NAT16Q8N8M0 369 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 MIR1-1HGQ9H1L0 117 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 PNMA8BQ9ULN7 279 aaPredicted RBP12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 TBC1D24Q9ULP9 559 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 SNX6Q9UNH7 406 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 HCFC2Q9Y5Z7 792 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 KCNE2Q9Y6J6 123 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 ZFC3H1O60293 1989 aaKnown RBP12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 A0A1W2PP18 115 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 ERI2A8K979 691 aaKnown RBP12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 A8MV72 311 aaPredicted RBP12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 LOC730098B7Z3J9 87 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 SERPINI2O75830 405 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 IPO13O94829 963 aaKnown RBP12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 CST3P01034 146 aaPredicted RBP12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 FTH1P02794 183 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 MT-ND1P03886 318 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 MT-ND2P03891 347 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 SOD2P04179 222 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 ATF4P18848 351 aaPredicted RBP12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 YWHAQP27348 245 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 PSMB4P28070 264 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 OR1G1P47890 313 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 NPY2RP49146 381 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 TKTL1P51854 596 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 IL5RAQ01344 420 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 GRIK2Q13002 908 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 IKZF1Q13422 519 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 TRIP4Q15650 581 aaPredicted RBP12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 SMAD1Q15797 465 aaKnown RBP12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 FAM83EQ2M2I3 478 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 ZNF699Q32M78 642 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 DCAF4L1Q3SXM0 396 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 GLYATQ6IB77 296 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 BLOC1S3Q6QNY0 202 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 IFNEQ86WN2 208 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 ACVR1CQ8NER5 493 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 AUTS2Q8WXX7 1259 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 OR2A14Q96R47 310 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 COLEC11Q9BWP8 271 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 CDADC1Q9BWV3 514 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms