RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 PCDHGA8Q9Y5G5 932 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 TYW5A2RUC4 315 aaKnown RBP10.55□□□□□ -0.72
VPS52-217ENST00000478934 PTGES3LE9PB15 166 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 BOLA2-SMG1P6H3BVE0 249 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 PITPNM1O00562 1244 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 RGS14O43566 566 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 XYLBO75191 536 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 STK16O75716 305 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 ZBTB11O95625 1053 aaPredicted RBP10.55□□□□□ -0.72
VPS52-217ENST00000478934 CST1P01037 141 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 ALPLP05186 524 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 UGT2B4P06133 528 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 UMPSP11172 480 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 SRCP12931 536 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 EPB42P16452 691 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 RPS3P23396 243 aaKnown RBP eCLIP10.55□□□□□ -0.72
VPS52-217ENST00000478934 FSHRP23945 695 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 HLA-FP30511 346 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 SPAM1P38567 509 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 RPIAP49247 311 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 EPHB3P54753 998 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 IL1RL1Q01638 556 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 NOGQ13253 232 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 BOP1Q14137 746 aaKnown RBP10.55□□□□□ -0.72
VPS52-217ENST00000478934 CRY1Q16526 586 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 PGS1Q32NB8 556 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 PLEKHG6Q3KR16 790 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 RETSATQ6NUM9 610 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 NEK5Q6P3R8 708 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 USP51Q70EK9 711 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 PXYLP1Q8TE99 480 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 OSCP1Q8WVF1 389 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 SCAMP4Q969E2 229 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 NCLNQ969V3 563 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 ASIC4Q96FT7 647 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 PPP3R2Q96LZ3 170 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 BARD1Q99728 777 aaKnown RBP10.55□□□□□ -0.72
VPS52-217ENST00000478934 BBS2Q9BXC9 721 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 EBPLQ9BY08 206 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 LHPPQ9H008 270 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 MTG2Q9H4K7 406 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 RETREG1Q9H6L5 497 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 ZDHHC6Q9H6R6 413 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 GPRC5BQ9NZH0 403 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 MAGEL2Q9UJ55 1249 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 VPS4AQ9UN37 437 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 EIF3LQ9Y262 564 aaKnown RBP10.55□□□□□ -0.72
VPS52-217ENST00000478934 XIRP2A4UGR9 3374 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 TRIM64CA6NLI5 447 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 GNGT2O14610 69 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 MLLT10P55197 1068 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 TPD52P55327 224 aaPredicted RBP10.55□□□□□ -0.72
VPS52-217ENST00000478934 NUP107P57740 925 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 NAA20P61599 178 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 CHRNB3Q05901 458 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 USP39Q53GS9 565 aaKnown RBP10.55□□□□□ -0.72
VPS52-217ENST00000478934 SULT1C3Q6IMI6 304 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 ADNP2Q6IQ32 1131 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 GALNT5Q7Z7M9 940 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 RBM23Q86U06 439 aaKnown RBP10.55□□□□□ -0.72
VPS52-217ENST00000478934 LMNTD1Q8N9Z9 388 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 GOLM1Q8NBJ4 401 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 TBC1D15Q8TC07 691 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 FNDC8Q8TC99 324 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 SNX19Q92543 992 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 APIPQ96GX9 242 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 CSF3RQ99062 836 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 AMBRA1Q9C0C7 1298 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 PPT2Q9UMR5 302 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 CORINQ9Y5Q5 1042 aa10.55□□□□□ -0.72
VPS52-217ENST00000478934 G3V2T6 193 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 RAP2AP10114 183 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 THRBP10828 461 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 CYP4B1P13584 511 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 PFKLP17858 780 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 MAP4P27816 1152 aaKnown RBP10.54□□□□□ -0.72
VPS52-217ENST00000478934 TLE2Q04725 743 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 ATP1A4Q13733 1029 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 DAG1Q14118 895 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 CTU2Q2VPK5 515 aaKnown RBP10.54□□□□□ -0.72
VPS52-217ENST00000478934 FAM98BQ52LJ0 330 aaKnown RBP10.54□□□□□ -0.72
VPS52-217ENST00000478934 TPGS2Q68CL5 300 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 ANKRD26P1Q6NSI1 321 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 ZNF783Q6ZMS7 281 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 MACC1Q6ZN28 852 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 DPY19L3Q6ZPD9 716 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 UBE2R2Q712K3 238 aaPredicted RBP10.54□□□□□ -0.72
VPS52-217ENST00000478934 SLC39A11Q8N1S5 342 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 OR2AP1Q8NGE2 309 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 GIPC3Q8TF64 312 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 FAM162AQ96A26 154 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 MYOCQ99972 504 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 ATP13A3Q9H7F0 1226 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 MRPL17Q9NRX2 175 aaKnown RBP10.54□□□□□ -0.72
VPS52-217ENST00000478934 HCFC1R1Q9NWW0 138 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 TUBA8Q9NY65 449 aaPredicted RBP10.54□□□□□ -0.72
VPS52-217ENST00000478934 FBXO10Q9UK96 956 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 ERVK-11Q9UQG0 969 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 SLC22A14Q9Y267 594 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 RANBP2P49792 3224 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 420.3 ms