RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 NSMCE4AQ9NXX6 385 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 NINJ2Q9NZG7 142 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 SLC39A10Q9ULF5 831 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 DHRS7Q9Y394 339 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 HEATR5BQ9P2D3 2071 aa6.69□□□□□ -1.34
BRCA1-215ENST00000478531 BOD1L1Q8NFC6 3051 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 IGHV5-51A0A0C4DH38 117 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 PIPSLA2A3N6 862 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 TLCD2A6NGC4 264 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 FAM159BA6NKW6 160 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 ARHGEF33A8MVX0 844 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 C2orf74A8MZ97 194 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 SPAG6O75602 509 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 FAM155BO75949 473 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 MATN4O95460 622 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 C1orf105O95561 183 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 SYF2O95926 243 aaKnown RBP6.68□□□□□ -1.34
BRCA1-215ENST00000478531 CATP04040 527 aaKnown RBP6.68□□□□□ -1.34
BRCA1-215ENST00000478531 ITGA2BP08514 1039 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 CHRM5P08912 532 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-215ENST00000478531 TPBGLP0DKB5 382 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 FGF3P11487 239 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-215ENST00000478531 FDXRP22570 491 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 PKLRP30613 574 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 PHBP35232 272 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 CCNFP41002 786 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 ARL4DP49703 201 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 RGS4P49798 205 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 RAB28P51157 221 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 SH3BP2P78314 561 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 FOXM1Q08050 763 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 CBLBQ13191 982 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 TSTA3Q13630 321 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-215ENST00000478531 KCNAB1Q14722 419 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 SLMAPQ14BN4 828 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 UAP1Q16222 522 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-215ENST00000478531 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.68□□□□□ -1.34
BRCA1-215ENST00000478531 CEP128Q6ZU80 1094 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 PRSS42Q7Z5A4 293 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 ARHGAP22Q7Z5H3 698 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 TRIM73Q86UV7 250 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 ADGRF3Q8IZF5 1079 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 EEF1AKMT1Q8WVE0 214 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 LINGO1Q96FE5 620 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 PRR11Q96HE9 360 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-215ENST00000478531 NAF1Q96HR8 494 aaKnown RBP6.68□□□□□ -1.34
BRCA1-215ENST00000478531 SLC46A1Q96NT5 459 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 CTRCQ99895 268 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 TSPYL1Q9H0U9 437 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 RHOJQ9H4E5 214 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 ZNF768Q9H5H4 540 aaKnown RBP6.68□□□□□ -1.34
BRCA1-215ENST00000478531 CAB39LQ9H9S4 337 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 ASCL3Q9NQ33 180 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 THSD1Q9NS62 852 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 SPHK1Q9NYA1 384 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 ACTR10Q9NZ32 417 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 EPHA6Q9UF33 1036 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 POMT2Q9UKY4 750 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 CORO1CQ9ULV4 474 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-215ENST00000478531 VWA7Q9Y334 891 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 PCDHGA8Q9Y5G5 932 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 PTPRQQ9UMZ3 2332 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 IGSF10Q6WRI0 2623 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 SMG1Q96Q15 3661 aaKnown RBP6.68□□□□□ -1.34
BRCA1-215ENST00000478531 PIEZO2Q9H5I5 2752 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 ISM1B1AKI9 464 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 MATN2O00339 956 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 RASGRF2O14827 1237 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 TLX3O43711 291 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-215ENST00000478531 PRAMEF10O60809 474 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 ANKRD34CP0C6C1 535 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 EBLN1P0CF75 366 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 CBSLP0DN79 551 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 ENO3P13929 434 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-215ENST00000478531 PVRP15151 417 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 UGT2B7P16662 529 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 MAP4P27816 1152 aaKnown RBP6.68□□□□□ -1.34
BRCA1-215ENST00000478531 PRDX3P30048 256 aaKnown RBP6.68□□□□□ -1.34
BRCA1-215ENST00000478531 SLC5A2P31639 672 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 CBSP35520 551 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 SKIV2L2P42285 1042 aaKnown RBP6.68□□□□□ -1.34
BRCA1-215ENST00000478531 SLC12A2P55011 1212 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 ST3GAL2Q16842 350 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 TBC1D25Q3MII6 688 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 SPESP1Q6UW49 350 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 UBE2R2Q712K3 238 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-215ENST00000478531 FAM20CQ8IXL6 584 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 LSMEM2Q8N112 164 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 MYO1HQ8N1T3 1032 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 RAB42Q8N4Z0 105 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 LINC01555Q8NAE3 123 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 UHMK1Q8TAS1 419 aaKnown RBP6.68□□□□□ -1.34
BRCA1-215ENST00000478531 MAGEC3Q8TD91 643 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 USP7Q93009 1102 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 RAD51AP1Q96B01 352 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 RBBP8Q99708 897 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 CPNE1Q99829 537 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 RAB33BQ9H082 229 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 APMAPQ9HDC9 416 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 ABCF3Q9NUQ8 709 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms