RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 ASPMQ8IZT6 3477 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 IGHV5-51A0A0C4DH38 117 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 FAM95CA0A1B0GW59 222 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 ARHGEF33A8MVX0 844 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 FAM155BO75949 473 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 MATN4O95460 622 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 ACSL3O95573 720 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 RPN2P04844 631 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 CHRM5P08912 532 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-222ENST00000478095 GSTA2P09210 222 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 ANKRD34CP0C6C1 535 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 FGF3P11487 239 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-222ENST00000478095 CDH3P22223 829 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 FDXRP22570 491 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 PKLRP30613 574 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 DEKP35659 375 aaKnown RBP9.95□□□□□ -0.82
HDAC6-222ENST00000478095 SH3BP2P78314 561 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 ZNF460Q14592 562 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 UGT3A1Q6NUS8 523 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 TTC23LQ6PF05 361 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 PRSS42Q7Z5A4 293 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 UHMK1Q8TAS1 419 aaKnown RBP9.95□□□□□ -0.82
HDAC6-222ENST00000478095 EEF1AKMT1Q8WVE0 214 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 USP7Q93009 1102 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 LINGO1Q96FE5 620 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 VPS39Q96JC1 886 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 SLC46A1Q96NT5 459 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 CTRCQ99895 268 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 RAB33BQ9H082 229 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 CDC42EP4Q9H3Q1 356 aaKnown RBP9.95□□□□□ -0.82
HDAC6-222ENST00000478095 RHOJQ9H4E5 214 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 ZNF768Q9H5H4 540 aaKnown RBP9.95□□□□□ -0.82
HDAC6-222ENST00000478095 ASCL3Q9NQ33 180 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 NSMCE4AQ9NXX6 385 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 ACTR10Q9NZ32 417 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 FOXJ2Q9P0K8 574 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 POMT2Q9UKY4 750 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 SLC39A10Q9ULF5 831 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 CORO1CQ9ULV4 474 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-222ENST00000478095 RAXQ9Y2V3 346 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 MTO1Q9Y2Z2 717 aaKnown RBP9.95□□□□□ -0.82
HDAC6-222ENST00000478095 VWA7Q9Y334 891 aa9.95□□□□□ -0.82
HDAC6-222ENST00000478095 FREM2Q5SZK8 3169 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 AKAP13Q12802 2813 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 PIPSLA2A3N6 862 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 TLCD2A6NGC4 264 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 SLC9B1P1A6NJY1 282 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 C2orf74A8MZ97 194 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 ISM1B1AKI9 464 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 C9orf172C9J069 976 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 TAF4O00268 1085 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 RASGRF2O14827 1237 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 TLX3O43711 291 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-222ENST00000478095 KDM1AO60341 852 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 PRAMEF10O60809 474 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 PSIP1O75475 530 aaKnown RBP9.94□□□□□ -0.82
HDAC6-222ENST00000478095 SPAG6O75602 509 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 DXOO77932 396 aaKnown RBP9.94□□□□□ -0.82
HDAC6-222ENST00000478095 SYF2O95926 243 aaKnown RBP9.94□□□□□ -0.82
HDAC6-222ENST00000478095 CATP04040 527 aaKnown RBP9.94□□□□□ -0.82
HDAC6-222ENST00000478095 CAPNS1P04632 268 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 ITGA2BP08514 1039 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 MPC1LP0DKB6 136 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 CBSLP0DN79 551 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 ENO3P13929 434 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-222ENST00000478095 PVRP15151 417 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 UGT2B7P16662 529 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 PRDX3P30048 256 aaKnown RBP9.94□□□□□ -0.82
HDAC6-222ENST00000478095 PEBP1P30086 187 aaKnown RBP9.94□□□□□ -0.82
HDAC6-222ENST00000478095 CBSP35520 551 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 GP5P40197 560 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 CCNFP41002 786 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 SKIV2L2P42285 1042 aaKnown RBP9.94□□□□□ -0.82
HDAC6-222ENST00000478095 ARL4DP49703 201 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 RGS4P49798 205 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 RAB28P51157 221 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 TAS2R39P59534 338 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 FOXM1Q08050 763 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 KCNAB1Q14722 419 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 TBC1D25Q3MII6 688 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 ANKS6Q68DC2 871 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 TMEM207Q6UWW9 146 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 CYHR1Q6ZMK1 362 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 NEK10Q6ZWH5 1172 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 CYS1Q717R9 158 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 CEP97Q8IW35 865 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 FAM20CQ8IXL6 584 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 LSMEM2Q8N112 164 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 MYO1HQ8N1T3 1032 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 BMPERQ8N8U9 685 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 LINC01555Q8NAE3 123 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 DENND1AQ8TEH3 1009 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 RAD51AP1Q96B01 352 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 NAF1Q96HR8 494 aaKnown RBP9.94□□□□□ -0.82
HDAC6-222ENST00000478095 CD180Q99467 661 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 RBBP8Q99708 897 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 CPNE1Q99829 537 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 MCMBPQ9BTE3 642 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 MENTQ9BUN1 341 aa9.94□□□□□ -0.82
HDAC6-222ENST00000478095 CAB39LQ9H9S4 337 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms