RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 ZNF549Q6P9A3 640 aa17.11■□□□□ 0.33
PTPN7-209ENST00000477554 UNC5AQ6ZN44 842 aa17.11■□□□□ 0.33
PTPN7-209ENST00000477554 TRMT10CQ7L0Y3 403 aaKnown RBP17.11■□□□□ 0.33
PTPN7-209ENST00000477554 CILP2Q8IUL8 1156 aa17.11■□□□□ 0.33
PTPN7-209ENST00000477554 PALM2Q8IXS6 379 aa17.11■□□□□ 0.33
PTPN7-209ENST00000477554 FBXO36Q8NEA4 188 aa17.11■□□□□ 0.33
PTPN7-209ENST00000477554 STAMBPL1Q96FJ0 436 aa17.11■□□□□ 0.33
PTPN7-209ENST00000477554 MENTQ9BUN1 341 aa17.11■□□□□ 0.33
PTPN7-209ENST00000477554 TFB2MQ9H5Q4 396 aaKnown RBP17.11■□□□□ 0.33
PTPN7-209ENST00000477554 FBXO6Q9NRD1 293 aaPredicted RBP17.11■□□□□ 0.33
PTPN7-209ENST00000477554 IL17BQ9UHF5 180 aa17.11■□□□□ 0.33
PTPN7-209ENST00000477554 PCDHGA4Q9Y5G9 962 aa17.11■□□□□ 0.33
PTPN7-209ENST00000477554 HEBP2Q9Y5Z4 205 aa17.11■□□□□ 0.33
PTPN7-209ENST00000477554 MRPS18BQ9Y676 258 aaKnown RBP17.11■□□□□ 0.33
PTPN7-209ENST00000477554 TLCD2A6NGC4 264 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 TOX3O15405 576 aaPredicted RBP17.1■□□□□ 0.33
PTPN7-209ENST00000477554 KIAA0754O94854 1291 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 S1PR4O95977 384 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 PRDX3P30048 256 aaKnown RBP17.1■□□□□ 0.33
PTPN7-209ENST00000477554 BDKRB1P46663 353 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 PGGT1BP53609 377 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 PMS2P54278 862 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 RAB15P59190 212 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 ZIC1Q15915 447 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 AARS2Q5JTZ9 985 aaKnown RBP17.1■□□□□ 0.33
PTPN7-209ENST00000477554 MANEAQ5SRI9 462 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 ZNF470Q6ECI4 717 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 PWWP2BQ6NUJ5 590 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 NEPROQ6NW34 567 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 CEACAM20Q6UY09 585 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 AMIGO1Q86WK6 493 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 CACNA2D3Q8IZS8 1091 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 GALNT6Q8NCL4 622 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 OR5K2Q8NHB8 316 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 GIMAP7Q8NHV1 300 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 ZFPM2Q8WW38 1151 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 RUFY1Q96T51 708 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 TXLNGYQ9BZA5 131 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 ASPSCR1Q9BZE9 553 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 SEMA4CQ9C0C4 833 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 B3GNT4Q9C0J1 378 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 MVB12BQ9H7P6 319 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 ACTR10Q9NZ32 417 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 ZC3H7BQ9UGR2 993 aaKnown RBP17.1■□□□□ 0.33
PTPN7-209ENST00000477554 CHMP2BQ9UQN3 213 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 KLHL20Q9Y2M5 609 aa17.1■□□□□ 0.33
PTPN7-209ENST00000477554 SPAG6O75602 509 aa17.09■□□□□ 0.33
PTPN7-209ENST00000477554 SLCO2B1O94956 709 aa17.09■□□□□ 0.33
PTPN7-209ENST00000477554 GSTA2P09210 222 aa17.09■□□□□ 0.33
PTPN7-209ENST00000477554 H2AFXP16104 143 aaPredicted RBP17.09■□□□□ 0.33
PTPN7-209ENST00000477554 PGAM1P18669 254 aa17.09■□□□□ 0.33
PTPN7-209ENST00000477554 RPS3P23396 243 aaKnown RBP eCLIP17.09■□□□□ 0.33
PTPN7-209ENST00000477554 NDUFS1P28331 727 aa17.09■□□□□ 0.33
PTPN7-209ENST00000477554 SLC1A2P43004 574 aa17.09■□□□□ 0.33
PTPN7-209ENST00000477554 TUBB3Q13509 450 aa17.09■□□□□ 0.33
PTPN7-209ENST00000477554 FASTKD3Q14CZ7 662 aaKnown RBP17.09■□□□□ 0.33
PTPN7-209ENST00000477554 ATP1A1-AS1Q5TC04 95 aa17.09■□□□□ 0.33
PTPN7-209ENST00000477554 TAX1BP1Q86VP1 789 aa17.09■□□□□ 0.33
PTPN7-209ENST00000477554 ANKMY2Q8IV38 441 aa17.09■□□□□ 0.33
PTPN7-209ENST00000477554 D2HGDHQ8N465 521 aa17.09■□□□□ 0.33
PTPN7-209ENST00000477554 LINC01555Q8NAE3 123 aa17.09■□□□□ 0.33
PTPN7-209ENST00000477554 SIDT2Q8NBJ9 832 aaKnown RBP17.09■□□□□ 0.33
PTPN7-209ENST00000477554 SNRNP27Q8WVK2 155 aaKnown RBP17.09■□□□□ 0.33
PTPN7-209ENST00000477554 TTC9Q92623 222 aa17.09■□□□□ 0.33
PTPN7-209ENST00000477554 OR2A14Q96R47 310 aa17.09■□□□□ 0.33
PTPN7-209ENST00000477554 ULBP3Q9BZM4 244 aa17.09■□□□□ 0.33
PTPN7-209ENST00000477554 CDC42EP4Q9H3Q1 356 aaKnown RBP17.09■□□□□ 0.33
PTPN7-209ENST00000477554 TMEM184BQ9Y519 407 aaPredicted RBP17.09■□□□□ 0.33
PTPN7-209ENST00000477554 QSOX1O00391 747 aa17.08■□□□□ 0.32
PTPN7-209ENST00000477554 USP1O94782 785 aa17.08■□□□□ 0.32
PTPN7-209ENST00000477554 GSTM1P09488 218 aa17.08■□□□□ 0.32
PTPN7-209ENST00000477554 FGF5P12034 268 aa17.08■□□□□ 0.32
PTPN7-209ENST00000477554 CD82P27701 267 aa17.08■□□□□ 0.32
PTPN7-209ENST00000477554 GSTM4Q03013 218 aa17.08■□□□□ 0.32
PTPN7-209ENST00000477554 ACSBG2Q5FVE4 666 aa17.08■□□□□ 0.32
PTPN7-209ENST00000477554 KLHL35Q6PF15 583 aa17.08■□□□□ 0.32
PTPN7-209ENST00000477554 RASGRP3Q8IV61 690 aa17.08■□□□□ 0.32
PTPN7-209ENST00000477554 TBC1D21Q8IYX1 336 aa17.08■□□□□ 0.32
PTPN7-209ENST00000477554 MREGQ8N565 214 aa17.08■□□□□ 0.32
PTPN7-209ENST00000477554 IL22RA1Q8N6P7 574 aa17.08■□□□□ 0.32
PTPN7-209ENST00000477554 SLC38A9Q8NBW4 561 aa17.08■□□□□ 0.32
PTPN7-209ENST00000477554 TTC1Q99614 292 aa17.08■□□□□ 0.32
PTPN7-209ENST00000477554 TRIT1Q9H3H1 467 aaKnown RBP17.08■□□□□ 0.32
PTPN7-209ENST00000477554 FAM60AQ9NP50 221 aa17.08■□□□□ 0.32
PTPN7-209ENST00000477554 GNPTGQ9UJJ9 305 aa17.08■□□□□ 0.32
PTPN7-209ENST00000477554 C1QL1O75973 258 aa17.07■□□□□ 0.32
PTPN7-209ENST00000477554 NTRK1P04629 796 aa17.07■□□□□ 0.32
PTPN7-209ENST00000477554 CHRM5P08912 532 aaPredicted RBP17.07■□□□□ 0.32
PTPN7-209ENST00000477554 ERVK-10P10266 1014 aa17.07■□□□□ 0.32
PTPN7-209ENST00000477554 UGT2B7P16662 529 aa17.07■□□□□ 0.32
PTPN7-209ENST00000477554 PAMP19021 973 aa17.07■□□□□ 0.32
PTPN7-209ENST00000477554 CDH3P22223 829 aa17.07■□□□□ 0.32
PTPN7-209ENST00000477554 PHBP35232 272 aa17.07■□□□□ 0.32
PTPN7-209ENST00000477554 UCNP55089 124 aa17.07■□□□□ 0.32
PTPN7-209ENST00000477554 HSD11B2P80365 405 aa17.07■□□□□ 0.32
PTPN7-209ENST00000477554 TIAL1Q01085 375 aaKnown RBP eCLIP17.07■□□□□ 0.32
PTPN7-209ENST00000477554 LY6DQ14210 128 aa17.07■□□□□ 0.32
PTPN7-209ENST00000477554 CRYMQ14894 314 aa17.07■□□□□ 0.32
PTPN7-209ENST00000477554 DEFB110Q30KQ9 67 aa17.07■□□□□ 0.32
PTPN7-209ENST00000477554 HSP90AA5PQ58FG0 334 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms