RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 K7ERQ8 282 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 PEX10O60683 326 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 RPS6KA4O75676 772 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 GOSR1O95249 250 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 GCNT3O95395 438 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 NSA2O95478 260 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 IGHV2-70P01814 119 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 C4BPAP04003 597 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 SERPINF2P08697 491 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 MLNP12872 115 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 SLC2A4P14672 509 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 HNRNPLP14866 589 aaKnown RBP eCLIP5.87□□□□□ -1.471e-9■□□□□ 8.8
ECHDC1-215ENST00000475319 BRAFP15056 766 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 HDCP19113 662 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 CYP2A7P20853 494 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 EDNRBP24530 442 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 PTBP1P26599 531 aaKnown RBP eCLIP5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 GCAP28676 217 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 ADRA1BP35368 520 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 NUP62P37198 522 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 OPRL1P41146 370 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 KIR3DL2P43630 455 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 VEGFCP49767 419 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 CPT1AP50416 773 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 NDST2P52849 883 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 PPP5CP53041 499 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 LGALS4P56470 323 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 DEFA1P59665 94 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 DEFA3P59666 94 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 ASIC1P78348 528 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 ZNF200P98182 395 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 ATP2C1P98194 919 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 DEFA6Q01524 100 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 PPATQ06203 517 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 EGR3Q06889 387 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 CHRNDQ07001 517 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 KRTAP1-1Q07627 177 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 SLC3A1Q07837 685 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 ART3Q13508 389 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 DNASE1L3Q13609 305 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 KCNJ11Q14654 390 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 PDK2Q15119 407 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 NECTIN1Q15223 517 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 FAM98BQ52LJ0 330 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 KLHL26Q53HC5 615 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 FGD3Q5JSP0 725 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 SLC9C2Q5TAH2 1124 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 MROH9Q5TGP6 573 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 TIGD3Q6B0B8 471 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 THAP5Q7Z6K1 395 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 CLEC10AQ8IUN9 316 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 LNX2Q8N448 690 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 FAM26EQ8N5C1 309 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 C10orf53Q8N6V4 93 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 IL17REQ8NFR9 667 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 OR9A1PQ8NGU1 263 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 ZNF384Q8TF68 577 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 DNAJA4Q8WW22 397 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 MTFMTQ96DP5 389 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 ELP4Q96EB1 424 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 ZHX1-C8orf76Q96EF9 292 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 ZNF845Q96IR2 970 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 ZNF597Q96LX8 424 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 LMF1Q96S06 567 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 PIGSQ96S52 555 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 FAM83CQ9BQN1 747 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 MYL10Q9BUA6 226 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 YTHDF1Q9BYJ9 559 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 METTL9Q9H1A3 318 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 NEUROG2Q9H2A3 272 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 EPB41L4BQ9H329 900 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 NIPAL2Q9H841 368 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 KCNK9Q9NPC2 374 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 DMRT3Q9NQL9 472 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 PDLIM7Q9NR12 457 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 ARL8BQ9NVJ2 186 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 ZNF224Q9NZL3 707 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 SH3BP4Q9P0V3 963 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 COPG2Q9UBF2 871 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 ASH2LQ9UBL3 628 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 LRWD1Q9UFC0 647 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 NDRG3Q9UGV2 375 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 LGALS13Q9UHV8 139 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 CDC14AQ9UNH5 594 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 SORCS3Q9UPU3 1222 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 BAIAP2Q9UQB8 552 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 RUVBL2Q9Y230 463 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 PCDHA13Q9Y5I0 950 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 FKBP7Q9Y680 259 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 ZMYM2Q9UBW7 1377 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 COL5A2P05997 1499 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 CAMTA1Q9Y6Y1 1673 aa5.87□□□□□ -1.47
ECHDC1-215ENST00000475319 COL15A1P39059 1388 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 PRAMEF25A6NGN4 478 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 FAM47DPA6NHR8 397 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 HACD1B0YJ81 288 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 DAPK3O43293 454 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 SLC22A5O76082 557 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 ZBTB7AO95365 584 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms