RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 CLDN19Q8N6F1 224 aa17.18■□□□□ 0.34
PCGF3-209ENST00000475288 OR5AR1Q8NGP9 310 aa17.18■□□□□ 0.34
PCGF3-209ENST00000475288 OR5K2Q8NHB8 316 aa17.18■□□□□ 0.34
PCGF3-209ENST00000475288 PPP4R1Q8TF05 950 aa17.18■□□□□ 0.34
PCGF3-209ENST00000475288 KRT35Q92764 455 aa17.18■□□□□ 0.34
PCGF3-209ENST00000475288 DLG3Q92796 817 aa17.18■□□□□ 0.34
PCGF3-209ENST00000475288 DNAJC1Q96KC8 554 aaKnown RBP17.18■□□□□ 0.34
PCGF3-209ENST00000475288 WDR77Q9BQA1 342 aaPredicted RBP17.18■□□□□ 0.34
PCGF3-209ENST00000475288 C10orf88Q9H8K7 445 aa17.18■□□□□ 0.34
PCGF3-209ENST00000475288 WDR54Q9H977 334 aa17.18■□□□□ 0.34
PCGF3-209ENST00000475288 ENAMQ9NRM1 1142 aa17.18■□□□□ 0.34
PCGF3-209ENST00000475288 DHCR7Q9UBM7 475 aaKnown RBP17.18■□□□□ 0.34
PCGF3-209ENST00000475288 PLCL2Q9UPR0 1127 aa17.18■□□□□ 0.34
PCGF3-209ENST00000475288 CDYLQ9Y232 598 aa17.18■□□□□ 0.34
PCGF3-209ENST00000475288 ASF1AQ9Y294 204 aa17.18■□□□□ 0.34
PCGF3-209ENST00000475288 NTNG1Q9Y2I2 539 aa17.18■□□□□ 0.34
PCGF3-209ENST00000475288 ANKRD12Q6UB98 2062 aa17.17■□□□□ 0.34
PCGF3-209ENST00000475288 KCNN4O15554 427 aa17.17■□□□□ 0.34
PCGF3-209ENST00000475288 PJA2O43164 708 aa17.17■□□□□ 0.34
PCGF3-209ENST00000475288 ALBP02768 609 aa17.17■□□□□ 0.34
PCGF3-209ENST00000475288 RBP3P10745 1247 aa17.17■□□□□ 0.34
PCGF3-209ENST00000475288 MMP11P24347 488 aa17.17■□□□□ 0.34
PCGF3-209ENST00000475288 DEFB110Q30KQ9 67 aa17.17■□□□□ 0.34
PCGF3-209ENST00000475288 KCTD11Q693B1 232 aa17.17■□□□□ 0.34
PCGF3-209ENST00000475288 TRIM73Q86UV7 250 aa17.17■□□□□ 0.34
PCGF3-209ENST00000475288 ZNF655Q8N720 491 aaPredicted RBP17.17■□□□□ 0.34
PCGF3-209ENST00000475288 STYXQ8WUJ0 223 aa17.17■□□□□ 0.34
PCGF3-209ENST00000475288 CDKN2AIPNLQ96HQ2 116 aa17.17■□□□□ 0.34
PCGF3-209ENST00000475288 CALR3Q96L12 384 aaKnown RBP17.17■□□□□ 0.34
PCGF3-209ENST00000475288 NDC1Q9BTX1 674 aa17.17■□□□□ 0.34
PCGF3-209ENST00000475288 SPHK1Q9NYA1 384 aa17.17■□□□□ 0.34
PCGF3-209ENST00000475288 CCDC88CQ9P219 2028 aa17.17■□□□□ 0.34
PCGF3-209ENST00000475288 SLC5A10A0PJK1 596 aa17.16■□□□□ 0.34
PCGF3-209ENST00000475288 CCL22O00626 93 aa17.16■□□□□ 0.34
PCGF3-209ENST00000475288 FTH1P02794 183 aa17.16■□□□□ 0.34
PCGF3-209ENST00000475288 TPBGLP0DKB5 382 aa17.16■□□□□ 0.34
PCGF3-209ENST00000475288 CTNNA1P35221 906 aaKnown RBP17.16■□□□□ 0.34
PCGF3-209ENST00000475288 MAGEA1P43355 309 aa17.16■□□□□ 0.34
PCGF3-209ENST00000475288 TSFMP43897 325 aaKnown RBP17.16■□□□□ 0.34
PCGF3-209ENST00000475288 EIF3EP60228 445 aaKnown RBP17.16■□□□□ 0.34
PCGF3-209ENST00000475288 DBN1Q16643 649 aa17.16■□□□□ 0.34
PCGF3-209ENST00000475288 TAS2R42Q7RTR8 314 aa17.16■□□□□ 0.34
PCGF3-209ENST00000475288 PIANPQ8IYJ0 282 aa17.16■□□□□ 0.34
PCGF3-209ENST00000475288 CCDC110Q8TBZ0 833 aa17.16■□□□□ 0.34
PCGF3-209ENST00000475288 OSBPL8Q9BZF1 889 aa17.16■□□□□ 0.34
PCGF3-209ENST00000475288 SLC26A1Q9H2B4 701 aa17.16■□□□□ 0.34
PCGF3-209ENST00000475288 ZBTB20Q9HC78 741 aaPredicted RBP17.16■□□□□ 0.34
PCGF3-209ENST00000475288 SLC22A11Q9NSA0 550 aa17.16■□□□□ 0.34
PCGF3-209ENST00000475288 PCDHA3Q9Y5H8 950 aa17.16■□□□□ 0.34
PCGF3-209ENST00000475288 PIM1P11309 404 aaPredicted RBP17.15■□□□□ 0.34
PCGF3-209ENST00000475288 CTNNA2P26232 953 aa17.15■□□□□ 0.34
PCGF3-209ENST00000475288 GLRBP48167 497 aa17.15■□□□□ 0.34
PCGF3-209ENST00000475288 ARSFP54793 590 aa17.15■□□□□ 0.34
PCGF3-209ENST00000475288 PER3P56645 1201 aa17.15■□□□□ 0.34
PCGF3-209ENST00000475288 YOD1Q5VVQ6 348 aaPredicted RBP17.15■□□□□ 0.34
PCGF3-209ENST00000475288 PRAMEF13Q5VWM6 474 aa17.15■□□□□ 0.34
PCGF3-209ENST00000475288 B3GNTL1Q67FW5 361 aaPredicted RBP17.15■□□□□ 0.34
PCGF3-209ENST00000475288 DARS2Q6PI48 645 aaKnown RBP17.15■□□□□ 0.34
PCGF3-209ENST00000475288 OVCH1Q7RTY7 1134 aa17.15■□□□□ 0.34
PCGF3-209ENST00000475288 KCNMB4Q86W47 210 aa17.15■□□□□ 0.34
PCGF3-209ENST00000475288 MRM3Q9HC36 420 aaKnown RBP17.15■□□□□ 0.34
PCGF3-209ENST00000475288 SLC6A20Q9NP91 592 aa17.15■□□□□ 0.34
PCGF3-209ENST00000475288 LUC7LQ9NQ29 371 aaKnown RBP17.15■□□□□ 0.34
PCGF3-209ENST00000475288 EURLQ9NYK6 297 aa17.15■□□□□ 0.34
PCGF3-209ENST00000475288 NOVA2Q9UNW9 492 aaKnown RBP17.15■□□□□ 0.34
PCGF3-209ENST00000475288 A0A1B0GX78 115 aa17.14■□□□□ 0.33
PCGF3-209ENST00000475288 AKR1B15C9JRZ8 316 aaPredicted RBP17.14■□□□□ 0.33
PCGF3-209ENST00000475288 BHMG1C9JSJ3 638 aaPredicted RBP17.14■□□□□ 0.33
PCGF3-209ENST00000475288 E2F3O00716 465 aa17.14■□□□□ 0.33
PCGF3-209ENST00000475288 CTSBP07858 339 aa17.14■□□□□ 0.33
PCGF3-209ENST00000475288 PRSS56P0CW18 603 aa17.14■□□□□ 0.33
PCGF3-209ENST00000475288 EDN3P14138 238 aa17.14■□□□□ 0.33
PCGF3-209ENST00000475288 ITGA3P26006 1051 aa17.14■□□□□ 0.33
PCGF3-209ENST00000475288 PEBP1P30086 187 aaKnown RBP17.14■□□□□ 0.33
PCGF3-209ENST00000475288 TBX2Q13207 712 aaPredicted RBP17.14■□□□□ 0.33
PCGF3-209ENST00000475288 PARP6Q2NL67 630 aa17.14■□□□□ 0.33
PCGF3-209ENST00000475288 C1QL3Q5VWW1 255 aa17.14■□□□□ 0.33
PCGF3-209ENST00000475288 ELMO1Q92556 727 aa17.14■□□□□ 0.33
PCGF3-209ENST00000475288 LRRC40Q9H9A6 602 aa17.14■□□□□ 0.33
PCGF3-209ENST00000475288 SMARCAL1Q9NZC9 954 aa17.14■□□□□ 0.33
PCGF3-209ENST00000475288 FBXL4Q9UKA2 621 aa17.14■□□□□ 0.33
PCGF3-209ENST00000475288 NXT1Q9UKK6 140 aaKnown RBP17.14■□□□□ 0.33
PCGF3-209ENST00000475288 CSMD1Q96PZ7 3565 aa17.14■□□□□ 0.33
PCGF3-209ENST00000475288 MACROD2A1Z1Q3 448 aa17.13■□□□□ 0.33
PCGF3-209ENST00000475288 MROH6A6NGR9 719 aa17.13■□□□□ 0.33
PCGF3-209ENST00000475288 F8W8V4 182 aa17.13■□□□□ 0.33
PCGF3-209ENST00000475288 SNRNP200O75643 2136 aaKnown RBP17.13■□□□□ 0.33
PCGF3-209ENST00000475288 TJP3O95049 919 aa17.13■□□□□ 0.33
PCGF3-209ENST00000475288 ITGAXP20702 1163 aa17.13■□□□□ 0.33
PCGF3-209ENST00000475288 TNFRSF8P28908 595 aa17.13■□□□□ 0.33
PCGF3-209ENST00000475288 RAB28P51157 221 aa17.13■□□□□ 0.33
PCGF3-209ENST00000475288 SPARCL1Q14515 664 aa17.13■□□□□ 0.33
PCGF3-209ENST00000475288 DNAJC21Q5F1R6 531 aaKnown RBP17.13■□□□□ 0.33
PCGF3-209ENST00000475288 AGAP7PQ5VUJ5 663 aa17.13■□□□□ 0.33
PCGF3-209ENST00000475288 SLC22A18Q96BI1 424 aa17.13■□□□□ 0.33
PCGF3-209ENST00000475288 VPS50Q96JG6 964 aa17.13■□□□□ 0.33
PCGF3-209ENST00000475288 AGAP4Q96P64 663 aa17.13■□□□□ 0.33
PCGF3-209ENST00000475288 SPSB2Q99619 263 aa17.13■□□□□ 0.33
PCGF3-209ENST00000475288 MENTQ9BUN1 341 aa17.13■□□□□ 0.33
PCGF3-209ENST00000475288 IRAK4Q9NWZ3 460 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms