RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 SPHK1Q9NYA1 384 aa13.49□□□□□ -0.25
CCDC78-209ENST00000474647 NOVA2Q9UNW9 492 aaKnown RBP13.49□□□□□ -0.25
CCDC78-209ENST00000474647 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.49□□□□□ -0.25
CCDC78-209ENST00000474647 ALG6Q9Y672 507 aa13.49□□□□□ -0.25
CCDC78-209ENST00000474647 HEATR5BQ9P2D3 2071 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 IGLV3-16A0A075B6K0 115 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 ARHGAP10A1A4S6 786 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 LRRTM2O43300 516 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 MFAP3LO75121 409 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 STK10O94804 968 aaKnown RBP13.48□□□□□ -0.25
CCDC78-209ENST00000474647 UMODP07911 640 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 ALAS2P22557 587 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 GABRA4P48169 554 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 PER3P56645 1201 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 OTUD4Q01804 1114 aaKnown RBP13.48□□□□□ -0.25
CCDC78-209ENST00000474647 AIMP2Q13155 320 aaKnown RBP13.48□□□□□ -0.25
CCDC78-209ENST00000474647 ZNF658BQ4V348 819 aaPredicted RBP13.48□□□□□ -0.25
CCDC78-209ENST00000474647 SYTL3Q4VX76 610 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 CRB2Q5IJ48 1285 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 IRAK1BP1Q5VVH5 260 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 MRPL14Q6P1L8 145 aaKnown RBP13.48□□□□□ -0.25
CCDC78-209ENST00000474647 TLDC1Q6P9B6 456 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 BBS12Q6ZW61 710 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 CDKL3Q8IVW4 592 aaPredicted RBP13.48□□□□□ -0.25
CCDC78-209ENST00000474647 CCDC110Q8TBZ0 833 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 ELMO1Q92556 727 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 KRT35Q92764 455 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 LRRC45Q96CN5 670 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 SLC6A20Q9NP91 592 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 SMARCAL1Q9NZC9 954 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 CDC23Q9UJX2 597 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 FBXL4Q9UKA2 621 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 INTUQ9ULD6 942 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 OSGIN2Q9Y236 505 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 CELSR1Q9NYQ6 3014 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 OTOGQ6ZRI0 2925 aa13.48□□□□□ -0.25
CCDC78-209ENST00000474647 TRBV5-4A0A0C4DH59 114 aa13.47□□□□□ -0.25
CCDC78-209ENST00000474647 CCDC78A2IDD5 438 aa13.47□□□□□ -0.25
CCDC78-209ENST00000474647 LIN7AO14910 233 aaPredicted RBP13.47□□□□□ -0.25
CCDC78-209ENST00000474647 EIF3EP60228 445 aaKnown RBP13.47□□□□□ -0.25
CCDC78-209ENST00000474647 CDC16Q13042 620 aa13.47□□□□□ -0.25
CCDC78-209ENST00000474647 NAA30Q147X3 362 aaPredicted RBP13.47□□□□□ -0.25
CCDC78-209ENST00000474647 PRAMEF13Q5VWM6 474 aa13.47□□□□□ -0.25
CCDC78-209ENST00000474647 DARS2Q6PI48 645 aaKnown RBP13.47□□□□□ -0.25
CCDC78-209ENST00000474647 NAPRTQ6XQN6 538 aa13.47□□□□□ -0.25
CCDC78-209ENST00000474647 TTLL10Q6ZVT0 673 aa13.47□□□□□ -0.25
CCDC78-209ENST00000474647 KCNMB4Q86W47 210 aa13.47□□□□□ -0.25
CCDC78-209ENST00000474647 FAM20CQ8IXL6 584 aa13.47□□□□□ -0.25
CCDC78-209ENST00000474647 ACTL9Q8TC94 416 aa13.47□□□□□ -0.25
CCDC78-209ENST00000474647 GRHL3Q8TE85 626 aa13.47□□□□□ -0.25
CCDC78-209ENST00000474647 PPP4R1Q8TF05 950 aa13.47□□□□□ -0.25
CCDC78-209ENST00000474647 MARVELD3Q96A59 401 aa13.47□□□□□ -0.25
CCDC78-209ENST00000474647 IMPACTQ9P2X3 320 aa13.47□□□□□ -0.25
CCDC78-209ENST00000474647 POLG2Q9UHN1 485 aa13.47□□□□□ -0.25
CCDC78-209ENST00000474647 PLCL2Q9UPR0 1127 aa13.47□□□□□ -0.25
CCDC78-209ENST00000474647 DCHS2Q6V1P9 2916 aa13.47□□□□□ -0.25
CCDC78-209ENST00000474647 CSMD2Q7Z408 3487 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 GSTM1P09488 218 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 RBP3P10745 1247 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 MAGP20916 626 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 PEBP1P30086 187 aaKnown RBP13.46□□□□□ -0.25
CCDC78-209ENST00000474647 CSE1LP55060 971 aaKnown RBP13.46□□□□□ -0.25
CCDC78-209ENST00000474647 SOX8P57073 446 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 GSTM4Q03013 218 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 CACNG1Q06432 222 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 MSLNQ13421 630 aaPredicted RBP13.46□□□□□ -0.25
CCDC78-209ENST00000474647 POU6F1Q14863 301 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 TCEAL1Q15170 157 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 DBN1Q16643 649 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 AGAP7PQ5VUJ5 663 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 DENND5AQ6IQ26 1287 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 SHISA6Q6ZSJ9 500 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 TAX1BP1Q86VP1 789 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 CNGA4Q8IV77 575 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 PARP9Q8IXQ6 854 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 TBC1D21Q8IYX1 336 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 OR5K2Q8NHB8 316 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 FLVCR1-AS1Q8TAF5 88 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 DNAJB14Q8TBM8 379 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 ANP32BQ92688 251 aaKnown RBP13.46□□□□□ -0.25
CCDC78-209ENST00000474647 DLG3Q92796 817 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 SPATA13Q96N96 652 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 AGAP4Q96P64 663 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 BARD1Q99728 777 aaKnown RBP13.46□□□□□ -0.25
CCDC78-209ENST00000474647 NLE1Q9NVX2 485 aaPredicted RBP13.46□□□□□ -0.25
CCDC78-209ENST00000474647 OR6C2Q9NZP2 312 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 TFR2Q9UP52 801 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 KLHL20Q9Y2M5 609 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 PRSS21Q9Y6M0 314 aa13.46□□□□□ -0.25
CCDC78-209ENST00000474647 AKR1B15C9JRZ8 316 aaPredicted RBP13.45□□□□□ -0.26
CCDC78-209ENST00000474647 E2F3O00716 465 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 KDM1AO60341 852 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 ZG16O60844 167 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 AP2A2O94973 939 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 FTH1P02794 183 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 TPH1P17752 444 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 MMP11P24347 488 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 NSG1P42857 185 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 MAGEA1P43355 309 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 ZNF169Q14929 603 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms